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Package 180/294HostnameOS / ArchBUILDCHECKBUILD BIN
miRNApath 1.2.0
James M. Ward
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/miRNApath
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: miRNApath
Version: 1.2.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes miRNApath_1.2.0.tar.gz
StartedAt: 2009-04-18 19:25:00 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 19:25:49 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 49.0 seconds
RetCode: 0
Status: OK
CheckDir: miRNApath.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/miRNApath.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'miRNApath/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'miRNApath' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'miRNApath' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating miRNApath-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating miRNApath-manual.tex ... OK
* checking miRNApath-manual.tex using pdflatex ... OK

miRNApath.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/miRNApath.Rcheck


---------- Making package miRNApath ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package miRNApath for lazy loading
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'miRNApath'
     Formats: text html latex example chm 
  checkColumns                      text    html    latex   example chm
  convertFoldChange                 text    html    latex   example chm
  filtermirnapath                   text    html    latex   example chm
  loadmirnapath                     text    html    latex   example chm
  loadmirnapathways                 text    html    latex   example chm
  loadmirnatogene                   text    html    latex   example chm
  miRNApath-package                 text    html    latex   example chm
  mirnaTable                        text    html    latex   example chm
  mirnaobj                          text    html    latex   example chm
  mirnapath-class                   text    html    latex   example chm
  runEnrichment                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-bioc\meat\miRNApath.Rcheck\00_pkg_src\miRNApath\chm\miRNApath.chm


Compile time: 0 minutes, 0 seconds
12	Topics
53	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-bioc\meat\miRNApath.Rcheck\00_pkg_src\miRNApath\chm\miRNApath.chm, 40,376 bytes
Compression decreased file by 25,059 bytes.
  adding MD5 sums

* DONE (miRNApath)