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Package 135/294HostnameOS / ArchBUILDCHECKBUILD BIN
hopach 2.2.0
Katherine S. Pollard
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/hopach
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: hopach
Version: 2.2.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD build hopach
StartedAt: 2009-04-18 16:19:14 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 16:20:30 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 76.1 seconds
RetCode: 0
Status: OK
PackageFile: hopach_2.2.0.tar.gz
PackageFileSize: 1.276 MiB

Command output

* checking for file 'hopach/DESCRIPTION' ... OK
* preparing 'hopach':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst509643734


---------- Making package hopach ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making Rdistances.d from Rdistances.c
making hdist.d from hdist.c
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c Rdistances.c -o Rdistances.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c hdist.c -o hdist.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include  -i hopach_res.rc -o hopach_res.o
gcc  -std=gnu99  -shared -s  -o hopach.dll hopach.def Rdistances.o hdist.o hopach_res.o  -Le:/biocbld/bbs-2.3-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  preparing package hopach for lazy loading
Loading required package: cluster
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Creating a new generic function for "as.vector" in "hopach"
Creating a generic function from function "as.hdist"
Creating a new generic function for "as.matrix" in "hopach"
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'hopach'
     Formats: text html latex example chm 
  boot2fuzzy                        text    html    latex   example chm
  bootplot                          text    html    latex   example chm
  bootstrap                         text    html    latex   example chm
  correlationordering               text    html    latex   example chm
  disscosangle                      text    html    latex   example chm
  distancematrix                    text    html    latex   example chm
  dplot                             text    html    latex   example chm
  golub                             text    html    latex           chm
  hdist-class                       text    html    latex   example chm
  hopach                            text    html    latex   example chm
  hopach.internal                   text    html    latex   example chm
  hopach2tree                       text    html    latex   example chm
  labelstomss                       text    html    latex   example chm
  makeoutput                        text    html    latex   example chm
  prune                             text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\hopach\chm\hopach.chm





Compile time: 0 minutes, 3 seconds

16	Topics

83	Local links

25	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\hopach\chm\hopach.chm, 63,673 bytes

Compression decreased file by 61,595 bytes.

  adding MD5 sums

* DONE (hopach)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'hopach_2.2.0.tar.gz'