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Package 88/294HostnameOS / ArchBUILDCHECKBUILD BIN
fbat 1.6.0
The R Genetics Project
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/fbat
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: fbat
Version: 1.6.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD build fbat
StartedAt: 2009-04-18 17:13:00 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 17:13:30 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 29.5 seconds
RetCode: 0
Status: OK
PackageFile: fbat_1.6.0.tar.gz
PackageFileSize: 163.7 KiB

Command output

* checking for file 'fbat/DESCRIPTION' ... OK
* preparing 'fbat':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst94074807


---------- Making package fbat ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making FBAT.d from FBAT.c
making register.d from register.c
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c FBAT.c -o FBAT.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c register.c -o register.o
gfortran   -O3  -c missGFreq.f -o missGFreq.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include  -i fbat_res.rc -o fbat_res.o
gcc  -std=gnu99  -shared -s  -o fbat.dll fbat.def FBAT.o register.o missGFreq.o fbat_res.o  -Le:/biocbld/bbs-2.3-bioc/R/bin   -lgfortran -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  preparing package fbat for lazy loading
Loading required package: MASS
Loading required package: GeneticsBase
Loading required package: combinat

Attaching package: 'combinat'


	The following object(s) are masked from package:utils :

	 combn 

Loading required package: xtable
Loading required package: mvtnorm
Loading required package: haplo.stats
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'fbat'
     Formats: text html latex example chm 
  checkMarkers                      text    html    latex   example chm
  checkMendelian                    text    html    latex   example chm
  fbat                              text    html    latex   example chm
Note: removing empty section \details in file 'getFounders.Rd'
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  getFounders                       text    html    latex           chm
Note: removing empty section \details in file 'missGFreq.Rd'
Note: removing empty section \details in file 'missGFreq.Rd'
  missGFreq                         text    html    latex   example chm
  pedAFreq                          text    html    latex   example chm
  pedFlagHomo                       text    html    latex   example chm
  pedGFreq                          text    html    latex   example chm
  pedHardyWeinberg                  text    html    latex   example chm
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  readHapMap                        text    html    latex           chm
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  readLink                          text    html    latex           chm
Note: removing empty section \details in file 'readPed.Rd'
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  readPed                           text    html    latex           chm
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  sampleInfoCEU                     text    html    latex   example chm
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  sampleInfoCHB                     text    html    latex   example chm
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  sampleInfoJPT                     text    html    latex   example chm
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  sampleInfoYRI                     text    html    latex   example chm
Note: removing empty section \value in file 'summaryPvalue.Rd'
Note: removing empty section \value in file 'summaryPvalue.Rd'
  summaryPvalue                     text    html    latex   example chm
  viewFlagHomo                      text    html    latex   example chm
  viewHW                            text    html    latex   example chm
  viewstat                          text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\fbat\chm\fbat.chm





Compile time: 0 minutes, 2 seconds

21	Topics

40	Local links

3	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\fbat\chm\fbat.chm, 36,667 bytes

Compression decreased file by 41,847 bytes.

  adding MD5 sums

* DONE (fbat)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'fbat_1.6.0.tar.gz'