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Package 14/294HostnameOS / ArchBUILDCHECKBUILD BIN
affyPara 1.2.1
Markus Schmidberger
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/affyPara
Last Changed Rev: 36978 / Revision: 38965
Last Changed Date: 2009-01-27 09:28:12 -0800 (Tue, 27 Jan 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: affyPara
Version: 1.2.1
Command: /home/biocbuild/bbs-2.3-bioc/R/bin/R CMD check --no-vignettes affyPara_1.2.1.tar.gz
StartedAt: 2009-04-18 14:42:33 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 14:43:12 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 38.5 seconds
RetCode: 0
Status: OK
CheckDir: affyPara.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.3-bioc/meat/affyPara.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: UTF-8
* checking for file 'affyPara/DESCRIPTION' ... OK
* this is package 'affyPara' version '1.2.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'affyPara' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating affyPara-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating affyPara-manual.tex ... OK
* checking affyPara-manual.tex using pdflatex ... OK

affyPara.Rcheck/00install.out:

* Installing *source* package 'affyPara' ...
** R
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: snow
Loading required package: vsn
Loading required package: lattice
Loading required package: limma
** help
 >>> Building/Updating help pages for package 'affyPara'
     Formats: text html latex example 
  affyParaIntern                    text    html    latex
  bgcPara                           text    html    latex   example
  computeExprSetPara                text    html    latex   example
  distributeFiles                   text    html    latex   example
  mergeSplitObjects                 text    html    latex   example
  normalizeAffyBatchConstantPara    text    html    latex   example
  normalizeAffyBatchInvariantsetPar text    html    latex   example
  normalizeAffyBatchLoessPara       text    html    latex   example
  normalizeAffyBatchLoessParaIter   text    html    latex   example
  normalizeAffyBatchQuantilesPara   text    html    latex   example
  preproPara                        text    html    latex   example
  removeDistributedFiles            text    html    latex   example
  rmaPara                           text    html    latex   example
  split                             text    html    latex   example
** building package indices ...
* DONE (affyPara)