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Package 111/294HostnameOS / ArchBUILDCHECKBUILD BIN
GenomeGraphs 1.2.3
Steffen Durinck
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/GenomeGraphs
Last Changed Rev: 37329 / Revision: 38965
Last Changed Date: 2009-02-11 18:53:22 -0800 (Wed, 11 Feb 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386 [ OK ] OK  OK 
Package: GenomeGraphs
Version: 1.2.3
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD build GenomeGraphs
StartedAt: 2009-04-18 16:28:32 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 16:30:54 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 141.8 seconds
RetCode: 0
Status: OK
PackageFile: GenomeGraphs_1.2.3.tar.gz
PackageFileSize: 557.6 KiB

Command output

* checking for file 'GenomeGraphs/DESCRIPTION' ... OK
* preparing 'GenomeGraphs':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'GenomeGraphs' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: biomaRt
Loading required package: grid
** help
 >>> Building/Updating help pages for package 'GenomeGraphs'
     Formats: text html latex example 
  AnnotationTrack-class             text    html    latex   example
  BaseTrack-class                   text    html    latex   example
  DisplayPars-class                 text    html    latex   example
  DisplayPars                       text    html    latex   example
  ExonArray-class                   text    html    latex   example
  Gene-class                        text    html    latex   example
  GeneModel-class                   text    html    latex   example
  GeneRegion-class                  text    html    latex   example
  GenericArray-class                text    html    latex   example
  GenomeAxis-class                  text    html    latex   example
  HighlightRegion-class             text    html    latex   example
  Ideogram-class                    text    html    latex   example
  Legend-class                      text    html    latex   example
  MappedRead-class                  text    html    latex   example
  Overlay-class                     text    html    latex   example
  RectangleOverlay-class            text    html    latex   example
  Segmentable-class                 text    html    latex   example
  Segmentation-class                text    html    latex   example
  TextOverlay-class                 text    html    latex   example
  Title-class                       text    html    latex   example
  Transcript-class                  text    html    latex   example
  TranscriptRegion-class            text    html    latex   example
  cn                                text    html    latex   example
Note: removing empty section \examples in file 'drawGD.Rd'
  drawGD                            text    html    latex
  exonProbePos                      text    html    latex   example
  gdObject-class                    text    html    latex   example
  gdPlot                            text    html    latex   example
Note: removing empty section \examples in file 'geneBiomart.Rd'
  geneBiomart                       text    html    latex
Note: removing empty section \examples in file 'geneRegionBiomart.Rd'
  geneRegionBiomart                 text    html    latex
  getPar                            text    html    latex   example
Note: removing empty section \references in file 'ideogramTab.Rd'
  ideogramTab                       text    html    latex   example
  intensity                         text    html    latex   example
Note: removing empty section \details in file 'makeAnnotationTrack.Rd'
  makeAnnotationTrack               text    html    latex   example
  makeBaseTrack                     text    html    latex   example
  makeExonArray                     text    html    latex   example
  makeGene                          text    html    latex   example
  makeGeneModel                     text    html    latex   example
  makeGeneRegion                    text    html    latex   example
  makeGenericArray                  text    html    latex   example
  makeGenomeAxis                    text    html    latex   example
Note: removing empty section \details in file 'makeIdeogram.Rd'
  makeIdeogram                      text    html    latex   example
  makeLegend                        text    html    latex   example
  makeRectangleOverlay              text    html    latex   example
  makeSegmentation                  text    html    latex   example
  makeTextOverlay                   text    html    latex   example
  makeTitle                         text    html    latex   example
  makeTranscript                    text    html    latex   example
  probestart                        text    html    latex   example
  segEnd                            text    html    latex   example
  segStart                          text    html    latex   example
  segments                          text    html    latex   example
Note: removing empty section \source in file 'seqDataEx.Rd'
  seqDataEx                         text    html    latex   example
  setPar                            text    html    latex   example
  showDisplayOptions                text    html    latex   example
  unrData                           text    html    latex   example
  unrNProbes                        text    html    latex   example
  unrPositions                      text    html    latex   example
  yeastCons1                        text    html    latex   example
** building package indices ...
* DONE (GenomeGraphs)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'GenomeGraphs_1.2.3.tar.gz'