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Package 111/294HostnameOS / ArchBUILDCHECKBUILD BIN
GenomeGraphs 1.2.3
Steffen Durinck
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/GenomeGraphs
Last Changed Rev: 37329 / Revision: 38965
Last Changed Date: 2009-02-11 18:53:22 -0800 (Wed, 11 Feb 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: GenomeGraphs
Version: 1.2.3
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD INSTALL --build --library=GenomeGraphs.buildbin-libdir GenomeGraphs_1.2.3.tar.gz
StartedAt: 2009-04-18 20:35:27 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 20:35:48 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 21.0 seconds
RetCode: 0
Status: OK
PackageFile: GenomeGraphs_1.2.3.zip
PackageFileSize: 1.108 MiB

Command output

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/GenomeGraphs.buildbin-libdir

Using auto-selected zip options 'GenomeGraphs-ZIPDATA=zip GenomeGraphs-HELP=ziponly'

---------- Making package GenomeGraphs ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package GenomeGraphs for lazy loading
Loading required package: biomaRt
Loading required package: grid
  installing man source files
  installing indices
  zipping data
  installing help
 >>> Building/Updating help pages for package 'GenomeGraphs'
     Formats: text html latex example chm 
  AnnotationTrack-class             text    html    latex   example chm
  BaseTrack-class                   text    html    latex   example chm
  DisplayPars-class                 text    html    latex   example chm
  DisplayPars                       text    html    latex   example chm
  ExonArray-class                   text    html    latex   example chm
  Gene-class                        text    html    latex   example chm
  GeneModel-class                   text    html    latex   example chm
  GeneRegion-class                  text    html    latex   example chm
  GenericArray-class                text    html    latex   example chm
  GenomeAxis-class                  text    html    latex   example chm
  HighlightRegion-class             text    html    latex   example chm
  Ideogram-class                    text    html    latex   example chm
  Legend-class                      text    html    latex   example chm
  MappedRead-class                  text    html    latex   example chm
  Overlay-class                     text    html    latex   example chm
  RectangleOverlay-class            text    html    latex   example chm
  Segmentable-class                 text    html    latex   example chm
  Segmentation-class                text    html    latex   example chm
  TextOverlay-class                 text    html    latex   example chm
  Title-class                       text    html    latex   example chm
  Transcript-class                  text    html    latex   example chm
  TranscriptRegion-class            text    html    latex   example chm
  cn                                text    html    latex   example chm
Note: removing empty section \examples in file 'drawGD.Rd'
Note: removing empty section \examples in file 'drawGD.Rd'
  drawGD                            text    html    latex           chm
  exonProbePos                      text    html    latex   example chm
  gdObject-class                    text    html    latex   example chm
  gdPlot                            text    html    latex   example chm
Note: removing empty section \examples in file 'geneBiomart.Rd'
Note: removing empty section \examples in file 'geneBiomart.Rd'
  geneBiomart                       text    html    latex           chm
Note: removing empty section \examples in file 'geneRegionBiomart.Rd'
Note: removing empty section \examples in file 'geneRegionBiomart.Rd'
  geneRegionBiomart                 text    html    latex           chm
  getPar                            text    html    latex   example chm
Note: removing empty section \references in file 'ideogramTab.Rd'
Note: removing empty section \references in file 'ideogramTab.Rd'
  ideogramTab                       text    html    latex   example chm
  intensity                         text    html    latex   example chm
Note: removing empty section \details in file 'makeAnnotationTrack.Rd'
Note: removing empty section \details in file 'makeAnnotationTrack.Rd'
  makeAnnotationTrack               text    html    latex   example chm
  makeBaseTrack                     text    html    latex   example chm
  makeExonArray                     text    html    latex   example chm
  makeGene                          text    html    latex   example chm
  makeGeneModel                     text    html    latex   example chm
  makeGeneRegion                    text    html    latex   example chm
  makeGenericArray                  text    html    latex   example chm
  makeGenomeAxis                    text    html    latex   example chm
Note: removing empty section \details in file 'makeIdeogram.Rd'
Note: removing empty section \details in file 'makeIdeogram.Rd'
  makeIdeogram                      text    html    latex   example chm
  makeLegend                        text    html    latex   example chm
  makeRectangleOverlay              text    html    latex   example chm
  makeSegmentation                  text    html    latex   example chm
  makeTextOverlay                   text    html    latex   example chm
  makeTitle                         text    html    latex   example chm
  makeTranscript                    text    html    latex   example chm
  probestart                        text    html    latex   example chm
  segEnd                            text    html    latex   example chm
  segStart                          text    html    latex   example chm
  segments                          text    html    latex   example chm
Note: removing empty section \source in file 'seqDataEx.Rd'
Note: removing empty section \source in file 'seqDataEx.Rd'
  seqDataEx                         text    html    latex   example chm
  setPar                            text    html    latex   example chm
  showDisplayOptions                text    html    latex   example chm
  unrData                           text    html    latex   example chm
  unrNProbes                        text    html    latex   example chm
  unrPositions                      text    html    latex   example chm
  yeastCons1                        text    html    latex   example chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.3184\GenomeGraphs\chm\GenomeGraphs.chm





Compile time: 0 minutes, 1 second

59	Topics

202	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.3184\GenomeGraphs\chm\GenomeGraphs.chm, 61,963 bytes

Compression decreased file by 109,034 bytes.

  adding MD5 sums

packaged installation of package 'GenomeGraphs' as GenomeGraphs_1.2.3.zip
* DONE (GenomeGraphs)