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Package 114/294HostnameOS / ArchBUILDCHECKBUILD BIN
GGBase 3.0.0
Vince Carey
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/GGBase
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: GGBase
Version: 3.0.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD build GGBase
StartedAt: 2009-04-18 17:33:06 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 17:34:50 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 103.9 seconds
RetCode: 0
Status: OK
PackageFile: GGBase_3.0.0.tar.gz
PackageFileSize: 50.23 MiB

Command output

* checking for file 'GGBase/DESCRIPTION' ... OK
* preparing 'GGBase':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst438804382


---------- Making package GGBase ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making glm_test.d from glm_test.c
making glm_test_R.d from glm_test_R.c
making mla.d from mla.c
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c glm_test.c -o glm_test.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c glm_test_R.c -o glm_test_R.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include     -O3 -Wall  -c mla.c -o mla.o
mla.c: In function 'wsum':
mla.c:155: warning: unused variable 'i'
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include  -i GGBase_res.rc -o GGBase_res.o
gcc  -std=gnu99  -shared -s  -o GGBase.dll GGBase.def glm_test.o glm_test_R.o mla.o GGBase_res.o  -Le:/biocbld/bbs-2.3-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  preparing package GGBase for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: GSEABase
Loading required package: AnnotationDbi
Loading required package: annotate
Loading required package: xtable
Loading required package: graph
Loading required package: snpMatrix
Loading required package: survival
Loading required package: splines
Loading required package: RSQLite
Loading required package: DBI
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'GGBase'
     Formats: text html latex example chm 
  casting                           text    html    latex   example chm
  gwSnpScreenResult-class           text    html    latex   example chm
  plot_EvG-methods                  text    html    latex   example chm
  smlSet-class                      text    html    latex   example chm
  snp.rhs.tests154                  text    html    latex   example chm
  snpLocs.Hs                        text    html    latex   example chm
  snpsNear                          text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\GGBase\chm\GGBase.chm





Compile time: 0 minutes, 0 seconds

8	Topics

80	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\GGBase\chm\GGBase.chm, 33,083 bytes

Compression decreased file by 26,542 bytes.

  adding MD5 sums

* DONE (GGBase)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'GGBase/inst/extdata' is empty
* building 'GGBase_3.0.0.tar.gz'