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Package 73/294HostnameOS / ArchBUILDCHECKBUILD BIN
DFP 1.0.0
Rodrigo Alvarez-Glez
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/DFP
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: DFP
Version: 1.0.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes DFP_1.0.0.tar.gz
StartedAt: 2009-04-18 18:39:28 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:40:15 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 46.2 seconds
RetCode: 0
Status: OK
CheckDir: DFP.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/DFP.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'DFP/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DFP' version '1.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'DFP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.plotGeneMF: no visible binding for global variable 'x'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating DFP-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating DFP-manual.tex ... OK
* checking DFP-manual.tex using pdflatex ... OK

DFP.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/DFP.Rcheck


---------- Making package DFP ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package DFP for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'DFP'
     Formats: text html latex example chm 
  DFP-internal                      text    html    latex           chm
  DFP-package                       text    html    latex   example chm
  ExpressionLevel-class             text    html    latex   example chm
  HighExpressionLevel-class         text    html    latex   example chm
  LowExpressionLevel-class          text    html    latex   example chm
  MediumExpressionLevel-class       text    html    latex   example chm
  calculateDiscriminantFuzzyPattern text    html    latex           chm
  calculateFuzzyPatterns            text    html    latex           chm
  calculateMembershipFunctions      text    html    latex           chm
  discretizeExpressionValues        text    html    latex           chm
  discriminantFuzzyPattern          text    html    latex   example chm
  plotDiscriminantFuzzyPattern      text    html    latex           chm
  plotMembershipFunctions           text    html    latex           chm
  readCSV                           text    html    latex   example chm
  rmadataset                        text    html    latex   example chm
  show-methods                      text    html    latex           chm
  showDiscreteValues                text    html    latex           chm
  showFuzzyPatterns                 text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-bioc\meat\DFP.Rcheck\00_pkg_src\DFP\chm\DFP.chm


Compile time: 0 minutes, 0 seconds
19	Topics
53	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-bioc\meat\DFP.Rcheck\00_pkg_src\DFP\chm\DFP.chm, 32,220 bytes
Compression decreased file by 42,763 bytes.
  adding MD5 sums

* DONE (DFP)