CGHcall 2.0.0
Sjoerd Vosse
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/CGHcall | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ WARNINGS ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | WARNINGS | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/CGHcall.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'CGHcall/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CGHcall' version '2.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CGHcall' can be installed ... WARNING
Found the following significant warnings:
WARNING: \code inside code block in file 'normalize.Rd'
WARNING: \code inside code block in file 'normalize.Rd'
See 'E:/biocbld/bbs-2.3-bioc/meat/CGHcall.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating CGHcall-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating CGHcall-manual.tex ... OK
* checking CGHcall-manual.tex using pdflatex ... OK
WARNING: There was 1 warning, see
E:/biocbld/bbs-2.3-bioc/meat/CGHcall.Rcheck/00check.log
for details
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/CGHcall.Rcheck
---------- Making package CGHcall ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package CGHcall for lazy loading
Loading required package: CGHbase
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: marray
Loading required package: limma
Loading required package: impute
Loading required package: DNAcopy
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'CGHcall'
Formats: text html latex example chm
CGHcall-package text html latex chm
CGHcall text html latex example chm
WARNING: \code inside code block in file 'normalize.Rd'
WARNING: \code inside code block in file 'normalize.Rd'
normalize text html latex example chm
preprocess text html latex example chm
segmentData text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\CGHcall.Rcheck\00_pkg_src\CGHcall\chm\CGHcall.chm
Compile time: 0 minutes, 8 seconds
6 Topics
10 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\CGHcall.Rcheck\00_pkg_src\CGHcall\chm\CGHcall.chm, 23,150 bytes
Compression increased file by 453 bytes.
adding MD5 sums
* DONE (CGHcall)