AffyCompatible 1.2.0
Martin Morgan
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/AffyCompatible | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ WARNINGS ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | WARNINGS | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/AffyCompatible.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'AffyCompatible/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'AffyCompatible' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'AffyCompatible' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... WARNING
xmlValue:
function(x, ignoreComments, recursive)
xmlValue.XMLAttributeValue:
function(x, ignoreComments)
xmlValue:
function(x, ignoreComments, recursive)
xmlValue.XMLAttributeValue:
function(x, ignoreComments)
See section 'Generic functions and methods' of the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating AffyCompatible-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating AffyCompatible-manual.tex ... OK
* checking AffyCompatible-manual.tex using pdflatex ... OK
WARNING: There was 1 warning, see
E:/biocbld/bbs-2.3-bioc/meat/AffyCompatible.Rcheck/00check.log
for details
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/AffyCompatible.Rcheck
---------- Making package AffyCompatible ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package AffyCompatible for lazy loading
Loading required package: XML
Loading required package: RCurl
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'AffyCompatible'
Formats: text html latex example chm
AffyCompatible-class text html latex example chm
AffyCompatible-package text html latex chm
NetAffxResource-class text html latex example chm
NetAffxResource text html latex chm
accessors-NetAffxResource text html latex chm
readArr text html latex example chm
readMage text html latex example chm
readNetAffx text html latex example chm
readXml text html latex example chm
xclass text html latex example chm
zzz-.TypedAssociation-class text html latex chm
zzz-ARRCompatibility-class text html latex example chm
zzz-DTTCompatibility-class text html latex example chm
zzz-NetAffxCompatibility-class text html latex example chm
zzz text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\AffyCompatible.Rcheck\00_pkg_src\AffyCompatible\chm\AffyCompatible.chm
Compile time: 0 minutes, 1 second
16 Topics
2,131 Local links
1 Internet link
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\AffyCompatible.Rcheck\00_pkg_src\AffyCompatible\chm\AffyCompatible.chm, 104,573 bytes
Compression decreased file by 866,863 bytes.
adding MD5 sums
* DONE (AffyCompatible)