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hgu2beta7 1.2.1
Biocore Team c/o BioC user list
Snapshot Date: 2008-10-16 12:02:11 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/hgu2beta7
Last Changed Rev: 453 / Revision: 729
Last Changed Date: 2007-09-10 10:29:54 -0700 (Mon, 10 Sep 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK [ OK ] OK 
Package: hgu2beta7
Version: 1.2.1
Command: /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R CMD check hgu2beta7_1.2.1.tar.gz
StartedAt: 2008-10-16 13:49:25 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 13:51:58 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 153.3 seconds
RetCode: 0
Status: OK
CheckDir: hgu2beta7.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.2-data-experiment/meat/hgu2beta7.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ASCII
* checking for file 'hgu2beta7/DESCRIPTION' ... OK
* this is package 'hgu2beta7' version '1.2.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'hgu2beta7' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating hgu2beta7-Ex.R ... OK
* checking examples ... OK
* creating hgu2beta7-manual.tex ... OK
* checking hgu2beta7-manual.tex using pdflatex ... OK

hgu2beta7.Rcheck/00install.out:

* Installing *source* package 'hgu2beta7' ...
** R
** data
**  moving datasets to lazyload DB
** help
 >>> Building/Updating help pages for package 'hgu2beta7'
     Formats: text html latex example 
  hgu2beta7                         text    html    latex
  hgu2beta7ACCNUM                   text    html    latex   example
  hgu2beta7CHR                      text    html    latex   example
  hgu2beta7CHRLENGTHS               text    html    latex   example
  hgu2beta7CHRLOC                   text    html    latex   example
  hgu2beta7ENZYME                   text    html    latex   example
  hgu2beta7ENZYME2PROBE             text    html    latex   example
  hgu2beta7GENENAME                 text    html    latex   example
  hgu2beta7GO                       text    html    latex   example
  hgu2beta7GO2ALLPROBES             text    html    latex   example
  hgu2beta7GO2PROBE                 text    html    latex   example
  hgu2beta7GRIF                     text    html    latex   example
  hgu2beta7LOCUSID                  text    html    latex   example
  hgu2beta7MAP                      text    html    latex   example
  hgu2beta7OMIM                     text    html    latex   example
  hgu2beta7ORGANISM                 text    html    latex   example
  hgu2beta7PATH                     text    html    latex   example
  hgu2beta7PATH2PROBE               text    html    latex   example
  hgu2beta7PMID                     text    html    latex   example
  hgu2beta7PMID2PROBE               text    html    latex   example
  hgu2beta7QC                       text    html    latex
  hgu2beta7REFSEQ                   text    html    latex   example
  hgu2beta7SUMFUNC                  text    html    latex   example
  hgu2beta7SYMBOL                   text    html    latex   example
  hgu2beta7UNIGENE                  text    html    latex   example
** building package indices ...
* DONE (hgu2beta7)