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Package 223/260HostnameOS / ArchBUILDCHECKBUILD BIN
SemSim 1.6.0
Xiang Guo
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/SemSim
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: SemSim
Version: 1.6.0
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check SemSim_1.6.0.tar.gz
StartedAt: 2008-10-16 07:24:04 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 07:26:35 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 150.5 seconds
RetCode: 0
Status: OK
CheckDir: SemSim.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/SemSim.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'SemSim/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'SemSim' version '1.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'SemSim' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Found possibly global 'T' or 'F' in the following function:
  mtermSim
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating SemSim-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating SemSim-manual.tex ... OK
* checking SemSim-manual.tex using pdflatex ... OK

SemSim.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-bioc/meat/SemSim.Rcheck


---------- Making package SemSim ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'SemSim'
     Formats: text html latex example chm 
  GOCount                           text    html    latex           chm
  Schreiber                         text    html    latex   example chm
  SemSim-internal                   text    html    latex           chm
  SemSim-package                    text    html    latex           chm
  geneSim                           text    html    latex   example chm
  mgeneSim                          text    html    latex   example chm
  mtermSim                          text    html    latex   example chm
  termSim                           text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-bioc\meat\SemSim.Rcheck\00_pkg_src\SemSim\chm\SemSim.chm


Compile time: 0 minutes, 0 seconds
9	Topics
25	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.2-bioc\meat\SemSim.Rcheck\00_pkg_src\SemSim\chm\SemSim.chm, 23,483 bytes
Compression decreased file by 1,234 bytes.
  adding MD5 sums

* DONE (SemSim)