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Package 129/260HostnameOS / ArchBUILDCHECKBUILD BIN
LMGene 1.10.0
John Tillinghast
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/LMGene
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: LMGene
Version: 1.10.0
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check LMGene_1.10.0.tar.gz
StartedAt: 2008-10-16 06:17:31 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 06:20:05 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 153.3 seconds
RetCode: 0
Status: OK
CheckDir: LMGene.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/LMGene.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'LMGene/DESCRIPTION' ... OK
* this is package 'LMGene' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'LMGene' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating LMGene-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating LMGene-manual.tex ... OK
* checking LMGene-manual.tex using pdflatex ... OK

LMGene.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-bioc/meat/LMGene.Rcheck


---------- Making package LMGene ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
Note: removing empty section \details
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Note: removing empty section \references
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Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \details
Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \seealso
 >>> Building/Updating help pages for package 'LMGene'
     Formats: text html latex example chm 
  GetLMObj                          text    html    latex   example chm
  LMGene                            text    html    latex   example chm
  genediff                          text    html    latex   example chm
  glog                              text    html    latex   example chm
  jggrad2                           text    html    latex   example chm
  jglog                             text    html    latex   example chm
  lnorm                             text    html    latex   example chm
  lnormeS                           text    html    latex   example chm
  mlm2lm                            text    html    latex   example chm
  msa                               text    html    latex   example chm
  msecalc                           text    html    latex   example chm
  msecalcmult                       text    html    latex   example chm
  neweS                             text    html    latex   example chm
  norm                              text    html    latex   example chm
  psmeans                           text    html    latex   example chm
  pvadjust                          text    html    latex   example chm
  rowaov                            text    html    latex   example chm
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  sample.eS                         text    html    latex   example chm
  sample.ind                        text    html    latex   example chm
  sample.mat                        text    html    latex   example chm
  tranest                           text    html    latex   example chm
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  tranestmult                       text    html    latex   example chm
  transeS                           text    html    latex   example chm
  vlist                             text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-bioc\meat\LMGene.Rcheck\00_pkg_src\LMGene\chm\LMGene.chm


Compile time: 0 minutes, 0 seconds
27	Topics
109	Local links
19	Internet links
1	Graphic


Created e:\biocbld\bbs-2.2-bioc\meat\LMGene.Rcheck\00_pkg_src\LMGene\chm\LMGene.chm, 38,807 bytes
Compression decreased file by 41,504 bytes.
  adding MD5 sums

* DONE (LMGene)