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Package 245/260HostnameOS / ArchBUILDCHECKBUILD BIN
timecourse 1.12.0
Yu Chuan Tai
Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/timecourse
Last Changed Rev: 31430 / Revision: 33132
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK [ OK ]
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: timecourse
Version: 1.12.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD check timecourse_1.12.0.tar.gz
StartedAt: 2008-08-08 05:57:48 -0700 (Fri, 08 Aug 2008)
EndedAt: 2008-08-08 05:58:57 -0700 (Fri, 08 Aug 2008)
EllapsedTime: 68.8 seconds
RetCode: 0
Status: OK
CheckDir: timecourse.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/home/biocbuild/bbs-2.2-bioc/meat/timecourse.Rcheck'
* using R version 2.7.1 (2008-06-23)
* using session charset: ISO8859-1
* checking for file 'timecourse/DESCRIPTION' ... OK
* this is package 'timecourse' version '1.12.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'timecourse' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
mb.2D : <anonymous>: no visible binding for global variable 'n'
mb.2D : <anonymous>: no visible binding for global variable 'T1'
mb.2D : <anonymous>: no visible binding for global variable 'xbar'
mb.2D : <anonymous>: no visible binding for global variable 'modS1'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating timecourse-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating timecourse-manual.tex ... OK
* checking timecourse-manual.tex using pdflatex ... OK

timecourse.Rcheck/00install.out:

* Installing *source* package 'timecourse' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: limma
Loading required package: MASS
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
 >>> Building/Updating help pages for package 'timecourse'
     Formats: text html latex example 
  abs2ratio                         text    html    latex
  fruitfly                          text    html    latex
  marrayTC-class                    text    html    latex
  matrix.cov                        text    html    latex
  mb.MANOVA                         text    html    latex   example
  mb.long                           text    html    latex   example
  ot.helmert                        text    html    latex
  plotProfile                       text    html    latex
  univ.func                         text    html    latex
** building package indices ...
* DONE (timecourse)