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Package 172/264HostnameOS / ArchBUILDCHECKBUILD BIN
pathRender 1.7.4
Li Long
Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/pathRender
Last Changed Rev: 30285 / Revision: 30951
Last Changed Date: 2008-02-29 03:24:16 -0800 (Fri, 29 Feb 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ WARNINGS ] OK 
pelham Mac OS X Leopard (10.5.1) / i386  OK  OK  OK 
Package: pathRender
Version: 1.7.4
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check pathRender_1.7.4.tar.gz
StartedAt: 2008-04-09 06:58:50 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 07:00:11 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 81.0 seconds
RetCode: 0
Status: WARNINGS
CheckDir: pathRender.Rcheck
Warnings: 1

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck'
* using R version 2.7.0 Under development (unstable) (2008-03-10 r44730)
* using session charset: ISO8859-1
* checking for file 'pathRender/DESCRIPTION' ... OK
* this is package 'pathRender' version '1.7.4'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pathRender' can be installed ... WARNING
Found the following significant warnings:
       missing link(s):  graphNEL-class graph-class
See 'E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating pathRender-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating pathRender-manual.tex ... OK
* checking pathRender-manual.tex using pdflatex ... OK

WARNING: There was 1 warning, see
  E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck/00check.log
for details

pathRender.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck


---------- Making package pathRender ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  preparing package pathRender for lazy loading
Loading required package: graph
Loading required package: Rgraphviz
Loading required package: grid
Loading required package: RColorBrewer
Loading required package: cMAP
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
Loading required package: RSQLite
  installing man source files
  installing indices
  installing help
Note: removing empty section \seealso
Note: removing empty section \seealso
 >>> Building/Updating help pages for package 'pathRender'
     Formats: text html latex example chm 
  colorNodes                        text    html    latex   example chm
  coloredGraph-class                text    html    latex   example chm
     missing link(s):  graphNEL-class graph-class
  graphcMAP                         text    html    latex   example chm
  plotExGraph                       text    html    latex   example chm
  pwayGraph-class                   text    html    latex   example chm
  reduceES                          text    html    latex   example chm
  rendercMAP                        text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-bioc\meat\pathRender.Rcheck\00_pkg_src\pathRender\chm\pathRender.chm


Compile time: 0 minutes, 0 seconds
8	Topics
18	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.2-bioc\meat\pathRender.Rcheck\00_pkg_src\pathRender\chm\pathRender.chm, 23,309 bytes
Compression decreased file by 2,021 bytes.
  adding MD5 sums

* DONE (pathRender)