Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S [T] U  V  W  X  Y  Z 

Package 239/251HostnameOS / ArchBUILDCHECKBUILD BIN
topGO 1.5.0
Adrian Alexa
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/topGO
Last Changed Rev: 27716 / Revision: 29143
Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  WARNINGS 
wilson2 Linux (openSUSE 10.3) / x86_64 [ OK ] WARNINGS 
wellington Linux (openSUSE 10.3) / i686  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
lemming Windows Server 2003 (32-bit) / x64  ERROR  skipped  skipped 
Package: topGO
Version: 1.5.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD build topGO
StartedAt: 2007-12-11 02:28:05 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 02:29:08 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 63.6 seconds
RetCode: 0
Status: OK
PackageFile: topGO_1.5.0.tar.gz
PackageFileSize: 538.3 KiB

Command output

* checking for file 'topGO/DESCRIPTION' ... OK
* preparing 'topGO':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
/tmp/Rinst3111448446
* Installing *source* package 'topGO' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: graph
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: GO
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: SparseM
Package SparseM (0.74) loaded.  To cite, see citation("SparseM")
Creating a new generic function for "print" in "topGO"
** help
Note: removing empty section \details
Note: removing empty section \value
Note: removing empty section \description
Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \section{Methods}
 >>> Building/Updating help pages for package 'topGO'
     Formats: text html latex example 
  GOFisherTest                      text    html    latex
  GOKSTest                          text    html    latex
  GOdata                            text    html    latex   example
  annFUN.hgu                        text    html    latex   example
  buildGOgraph.topology             text    html    latex
  buildLevels                       text    html    latex   example
  classicCount-class                text    html    latex   example
  classicScore-class                text    html    latex   example
  elimCount-class                   text    html    latex   example
  elimScore-class                   text    html    latex   example
  getPvalues                        text    html    latex   example
  getSigGroups                      text    html    latex   example
  groupGOTerms                      text    html    latex
  groupStats-class                  text    html    latex   example
  inducedGraph                      text    html    latex   example
  mapGenes2GOgraph                  text    html    latex   example
  printGenes-methods                text    html    latex
  printGraph-methods                text    html    latex   example
  reverseArch                       text    html    latex   example
  topGO-package                     text    html    latex
  topGOdata-class                   text    html    latex   example
  topGOresult-class                 text    html    latex
  weightCount-class                 text    html    latex   example
  weightScore-class                 text    html    latex
** building package indices ...
* DONE (topGO)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'topGO_1.5.0.tar.gz'