Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O [P] Q  R  S  T  U  V  W  X  Y  Z 

Package 175/251HostnameOS / ArchBUILDCHECKBUILD BIN
plw 0.99.2
Magnus Astrand
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/plw
Last Changed Rev: 29054 / Revision: 29143
Last Changed Date: 2007-12-05 15:29:37 -0800 (Wed, 05 Dec 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64 [ OK ] OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
lemming Windows Server 2003 (32-bit) / x64  ERROR  skipped  skipped 
Package: plw
Version: 0.99.2
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD build plw
StartedAt: 2007-12-11 02:40:30 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 02:40:49 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 19.1 seconds
RetCode: 0
Status: OK
PackageFile: plw_0.99.2.tar.gz
PackageFileSize: 853.1 KiB

Command output

* checking for file 'plw/DESCRIPTION' ... OK
* preparing 'plw':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
/tmp/Rinst3050004151
* Installing *source* package 'plw' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c SpecialFunctions.c -o SpecialFunctions.o
SpecialFunctions.c: In function ‘getPosteriorMeansAndOdds’:
SpecialFunctions.c:20: warning: unused variable ‘j’
SpecialFunctions.c: In function ‘order_stat_by_index’:
SpecialFunctions.c:565: warning: suggest parentheses around comparison in operand of &
SpecialFunctions.c: In function ‘median_by_index’:
SpecialFunctions.c:594: warning: suggest parentheses around comparison in operand of &
SpecialFunctions.c: In function ‘mad_by_index’:
SpecialFunctions.c:616: warning: suggest parentheses around comparison in operand of &
SpecialFunctions.c: In function ‘mean_by_index’:
SpecialFunctions.c:639: warning: suggest parentheses around comparison in operand of &
SpecialFunctions.c: In function ‘sd_by_index’:
SpecialFunctions.c:662: warning: suggest parentheses around comparison in operand of &
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c SpecialOptim.c -o SpecialOptim.o
SpecialOptim.c:10: warning: ‘matrix’ defined but not used
gcc -std=gnu99 -shared -L/usr/local/lib64 -o plw.so SpecialFunctions.o SpecialOptim.o   -L/home/biocbuild/bbs-2.2-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Loading required package: MASS
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: splines
** help
 >>> Building/Updating help pages for package 'plw'
     Formats: text html latex example 
  AffySpikeU95Subset                text    html    latex
  estimateMVbeta                    text    html    latex
  estimateSigma                     text    html    latex
  estimateSigmaMV                   text    html    latex
  estimateSigmaMVbeta               text    html    latex
  getKnots                          text    html    latex
  lmw                               text    html    latex   example
  logitT                            text    html    latex   example
  plw-package                       text    html    latex
  plw                               text    html    latex   example
  scaleParameterPlot                text    html    latex   example
  statByIndex                       text    html    latex   example
  topRankSummary                    text    html    latex   example
  varHistPlot                       text    html    latex   example
** building package indices ...
* DONE (plw)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'plw_0.99.2.tar.gz'