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Package 158/251HostnameOS / ArchBUILDCHECKBUILD BIN
ontoTools 1.15.0
Vince Carey
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ontoTools
Last Changed Rev: 27716 / Revision: 29143
Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
Package: ontoTools
Version: 1.15.0
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD build ontoTools
StartedAt: 2007-12-11 02:58:46 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 03:00:55 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 129.1 seconds
RetCode: 0
Status: OK
PackageFile: ontoTools_1.15.0.tar.gz
PackageFileSize: 3.322 MiB

Command output

* checking for file 'ontoTools/DESCRIPTION' ... OK
* preparing 'ontoTools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.2-bioc/tmpdir/Rinst344449267


---------- Making package ontoTools ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package ontoTools for lazy loading
Loading required package: graph
Loading required package: SparseM
Loading required package: GO
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
Creating a new generic function for "grep" in "ontoTools"
  installing man source files
  installing indices
  not zipping data
  installing help
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \value
Note: removing empty section \references
Note: removing empty section \value
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \references
Note: removing empty section \references
 >>> Building/Updating help pages for package 'ontoTools'
     Formats: text html latex example chm 
  A.csr                             text    html    latex           chm
  GDI                               text    html    latex   example chm
  LLGOMFcp                          text    html    latex           chm
  OOC-class                         text    html    latex   example chm
  SGDIvocab                         text    html    latex   example chm
  STMA                              text    html    latex   example chm
  accessMat                         text    html    latex           chm
  buildGOgraph                      text    html    latex   example chm
  compoundGraph-class               text    html    latex           chm
  depthStruct                       text    html    latex   example chm
  gomfAmat                          text    html    latex           chm
  litOnto                           text    html    latex           chm
  namedSparse-class                 text    html    latex   example chm
  ontology-class                    text    html    latex   example chm
  ooMapLL2GOMFdemo                  text    html    latex           chm
  otkvEnv2namedSparse               text    html    latex   example chm
  rootedDAG-class                   text    html    latex           chm
  semsim                            text    html    latex   example chm
  taggedHierNomenclature-class      text    html    latex   example chm
  toDot-methods                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.2-bioc\meat\ontoTools\chm\ontoTools.chm





Compile time: 0 minutes, 1 second

21	Topics

179	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.2-bioc\meat\ontoTools\chm\ontoTools.chm, 43,866 bytes

Compression decreased file by 62,183 bytes.

  adding MD5 sums

* DONE (ontoTools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'ontoTools_1.15.0.tar.gz'