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Package 142/251HostnameOS / ArchBUILDCHECKBUILD BIN
Mfuzz 1.9.0
Matthias Futschik
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Mfuzz
Last Changed Rev: 27716 / Revision: 29143
Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
Package: Mfuzz
Version: 1.9.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD check Mfuzz_1.9.0.tar.gz
StartedAt: 2007-12-11 07:09:59 -0800 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 07:11:34 -0800 (Tue, 11 Dec 2007)
EllapsedTime: 95.5 seconds
RetCode: 0
Status: OK
CheckDir: Mfuzz.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/Mfuzz.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-09 r43632)
* checking for file 'Mfuzz/DESCRIPTION' ... OK
* this is package 'Mfuzz' version '1.9.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Mfuzz' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating Mfuzz-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './Mfuzz.tex' ...
LaTeX Warning: Citation `bronwyn' on page 1 undefined on input line 21.
LaTeX Warning: Citation `cho' on page 2 undefined on input line 50.
LaTeX Warning: Citation `bronwyn' on page 2 undefined on input line 53.
LaTeX Warning: Citation `bezdak' on page 4 undefined on input line 146.
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './Mfuzz.tex' ...
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './Mfuzz.tex' ...
* creating Mfuzz-manual.tex ... OK
* checking Mfuzz-manual.tex ... OK

Mfuzz.Rcheck/00install.out:

/loc/home/biocbuild/bbs-2.2-bioc/meat/Mfuzz.Rcheck
* Installing *source* package 'Mfuzz' ...
** R
** data
** inst
** help
Note: unmatched right brace in 'standardise2' on or after line 34
 >>> Building/Updating help pages for package 'Mfuzz'
     Formats: text html latex example 
  acore                             text    html    latex   example
  cselection                        text    html    latex   example
  fill.NA                           text    html    latex   example
  filter.NA                         text    html    latex   example
  filter.std                        text    html    latex   example
  kmeans2                           text    html    latex   example
  kmeans2.plot                      text    html    latex   example
  mfuzz                             text    html    latex   example
  mfuzz.plot                        text    html    latex   example
  mfuzz.plot2                       text    html    latex   example
  mfuzzColorBar                     text    html    latex   example
  overlap                           text    html    latex   example
  overlap.plot                      text    html    latex   example
  partcoef                          text    html    latex   example
  randomise                         text    html    latex   example
  standardise                       text    html    latex   example
  standardise2                      text    html    latex   example
  top.count                         text    html    latex   example
  yeast                             text    html    latex
** building package indices ...
* DONE (Mfuzz)