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Package 140/251HostnameOS / ArchBUILDCHECKBUILD BIN
MergeMaid 2.11.0
Xiaogang Zhong
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MergeMaid
Last Changed Rev: 27716 / Revision: 29143
Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
Package: MergeMaid
Version: 2.11.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD check MergeMaid_2.11.0.tar.gz
StartedAt: 2007-12-11 07:06:32 -0800 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 07:13:26 -0800 (Tue, 11 Dec 2007)
EllapsedTime: 414.7 seconds
RetCode: 0
Status: OK
CheckDir: MergeMaid.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/MergeMaid.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-09 r43632)
* checking for file 'MergeMaid/DESCRIPTION' ... OK
* this is package 'MergeMaid' version '2.11.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'MergeMaid' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.fdr.mergeCor: no visible global function definition for ‘.getnull’
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating MergeMaid-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './MergeMaid.tex' ...
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './MergeMaid.tex' ...
* creating MergeMaid-manual.tex ... OK
* checking MergeMaid-manual.tex ... OK

MergeMaid.Rcheck/00install.out:

/loc/home/biocbuild/bbs-2.2-bioc/meat/MergeMaid.Rcheck
* Installing *source* package 'MergeMaid' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: survival
Loading required package: splines
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: MASS
Creating a new generic function for "plot" in "MergeMaid"
Creating a new generic function for "hist" in "MergeMaid"
Creating a new generic function for "summary" in "MergeMaid"
** help
 >>> Building/Updating help pages for package 'MergeMaid'
     Formats: text html latex example 
  class.mergeCoeff                  text    html    latex   example
  class.mergeCor                    text    html    latex   example
  class.mergeExpressionSet          text    html    latex   example
  intCor                            text    html    latex   example
  intcorDens                        text    html    latex   example
  intersection                      text    html    latex   example
  mergeData                         text    html    latex
  mergeExprs                        text    html    latex   example
  modelOutcome                      text    html    latex   example
** building package indices ...
* DONE (MergeMaid)