Back to the "Multiple platform build/check report"

BioC experimental data: CHECK report for geneLenDataBase on zin2

This page was generated on 2014-10-04 17:40:15 -0700 (Sat, 04 Oct 2014).

Package 84/197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
geneLenDataBase 1.0.0
Matthew Young , Nadia Davidson
Snapshot Date: 2014-10-04 07:15:22 -0700 (Sat, 04 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_2_14/experiment/pkgs/geneLenDataBase
Last Changed Rev: 2799 / Revision: 3055
Last Changed Date: 2014-04-11 14:27:08 -0700 (Fri, 11 Apr 2014)
zin2 Linux (Ubuntu 12.04.4 LTS) / x86_64  NotNeeded  OK [ WARNINGS ]
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  WARNINGS  OK 

Summary

Package: geneLenDataBase
Version: 1.0.0
Command: /home/biocbuild/bbs-2.14-bioc/R/bin/R CMD check --no-vignettes --timings geneLenDataBase_1.0.0.tar.gz
StartedAt: 2014-10-04 09:16:45 -0700 (Sat, 04 Oct 2014)
EndedAt: 2014-10-04 09:23:18 -0700 (Sat, 04 Oct 2014)
EllapsedTime: 393.2 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: geneLenDataBase.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-2.14-bioc/R/bin/R CMD check --no-vignettes --timings geneLenDataBase_1.0.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-2.14-data-experiment/meat/geneLenDataBase.Rcheck’
* using R version 3.1.1 (2014-07-10)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘geneLenDataBase/DESCRIPTION’ ... OK
* this is package ‘geneLenDataBase’ version ‘1.0.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘geneLenDataBase’ can be installed ... [21s/25s] OK
* checking installed package size ... NOTE
  installed size is 100.3Mb
  sub-directories of 1Mb or more:
    data  99.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
':::' call which should be '::': ‘GenomicFeatures:::supportedUCSCtables’
  See the note in ?`:::` about the use of this operator.
Unexported object imported by a ':::' call: ‘GenomicFeatures:::.UCSC_TXNAME2GENEID_MAPDEFS’
  See the note in ?`:::` about the use of this operator.
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... WARNING
Missing link or links in documentation object 'anoCar1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoCar1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoCar1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'aplCal1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'braFlo1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeJap1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caePb1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caePb2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeRem2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeRem3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cb1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cb3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.vegaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.vegaPseudoGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.nscanPasaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droEre1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droEre1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droGri1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droGri1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droPer1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droPer1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSec1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSec1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'gasAcu1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'gasAcu1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.acescan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.vegaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.vegaPseudoGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.acescan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.knownGeneOld3.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.sibGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'loxAfr3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.sibGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'petMar1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'priPac1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'sacCer1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'sacCer2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

See the information in section 'Cross-references' of the 'Writing R
Extensions' manual.

* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [81s/85s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
  ‘/home/biocbuild/bbs-2.14-data-experiment/meat/geneLenDataBase.Rcheck/00check.log’
for details.

geneLenDataBase.Rcheck/00install.out:

* installing *source* package ‘geneLenDataBase’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (geneLenDataBase)

geneLenDataBase.Rcheck/geneLenDataBase-Ex.timings:

nameusersystemelapsed
anoCar1.ensGene.LENGTH0.1080.0120.146
anoCar1.genscan.LENGTH0.0720.0080.084
anoCar1.xenoRefGene.LENGTH1.5960.0001.687
anoGam1.ensGene.LENGTH0.4080.0200.432
anoGam1.geneid.LENGTH0.0720.0040.074
anoGam1.genscan.LENGTH0.0600.0080.067
apiMel1.genscan.LENGTH0.0520.0040.058
apiMel2.ensGene.LENGTH0.1240.0080.134
apiMel2.geneid.LENGTH0.0720.0120.081
apiMel2.genscan.LENGTH0.0480.0080.054
aplCal1.xenoRefGene.LENGTH0.5760.0000.577
bosTau2.geneSymbol.LENGTH0.0600.0040.063
bosTau2.geneid.LENGTH0.5240.0000.524
bosTau2.genscan.LENGTH0.0840.0200.105
bosTau2.refGene.LENGTH0.0400.0280.069
bosTau2.sgpGene.LENGTH0.1160.0000.116
bosTau3.ensGene.LENGTH0.1800.0120.190
bosTau3.geneSymbol.LENGTH0.0480.0080.056
bosTau3.geneid.LENGTH0.20.00.2
bosTau3.genscan.LENGTH0.0760.0120.089
bosTau3.refGene.LENGTH0.0440.0120.057
bosTau3.sgpGene.LENGTH0.1240.0080.132
bosTau4.ensGene.LENGTH0.1760.0120.190
bosTau4.geneSymbol.LENGTH0.0520.0040.059
bosTau4.genscan.LENGTH0.4080.0120.429
bosTau4.nscanGene.LENGTH0.0360.0160.050
bosTau4.refGene.LENGTH0.0480.0120.059
braFlo1.xenoRefGene.LENGTH0.5120.0040.522
caeJap1.xenoRefGene.LENGTH0.4480.0040.456
caePb1.xenoRefGene.LENGTH0.6960.0040.718
caePb2.xenoRefGene.LENGTH0.8650.0000.876
caeRem2.xenoRefGene.LENGTH0.4840.0000.486
caeRem3.xenoRefGene.LENGTH0.5120.0000.515
calJac1.genscan.LENGTH0.0880.0200.110
calJac1.nscanGene.LENGTH0.1560.0040.166
calJac1.xenoRefGene.LENGTH1.0240.0041.045
canFam1.ensGene.LENGTH0.2240.0000.224
canFam1.geneSymbol.LENGTH0.0040.0040.009
canFam1.genscan.LENGTH0.0760.0040.084
canFam1.nscanGene.LENGTH0.0760.0000.078
canFam1.refGene.LENGTH0.0120.0000.009
canFam1.xenoRefGene.LENGTH1.2080.0001.316
canFam2.ensGene.LENGTH0.1440.0080.152
canFam2.geneSymbol.LENGTH0.0120.0000.009
canFam2.genscan.LENGTH0.0720.0040.077
canFam2.nscanGene.LENGTH0.0800.0040.083
canFam2.refGene.LENGTH0.0080.0000.009
canFam2.xenoRefGene.LENGTH0.7960.0040.851
cavPor3.ensGene.LENGTH0.4200.0080.515
cavPor3.genscan.LENGTH0.1200.0040.140
cavPor3.nscanGene.LENGTH0.0760.0120.088
cavPor3.xenoRefGene.LENGTH0.8840.0040.891
cb1.xenoRefGene.LENGTH0.6160.0000.617
cb3.xenoRefGene.LENGTH0.4800.0040.487
ce2.geneSymbol.LENGTH0.0960.0320.132
ce2.geneid.LENGTH0.1120.0000.113
ce2.refGene.LENGTH0.0960.0200.115
ce4.geneSymbol.LENGTH0.0760.0440.121
ce4.refGene.LENGTH0.0800.0360.116
ce4.xenoRefGene.LENGTH0.1080.0000.114
ce6.ensGene.LENGTH0.2200.0120.236
ce6.geneSymbol.LENGTH0.1120.0120.123
ce6.refGene.LENGTH0.0840.0360.120
ce6.xenoRefGene.LENGTH0.1080.0000.110
ci1.geneSymbol.LENGTH0.0040.0040.009
ci1.refGene.LENGTH0.0040.0040.009
ci1.xenoRefGene.LENGTH0.2320.0040.238
ci2.ensGene.LENGTH0.0800.0000.081
ci2.geneSymbol.LENGTH0.0120.0000.008
ci2.refGene.LENGTH0.0080.0000.009
ci2.xenoRefGene.LENGTH0.4280.0000.432
danRer3.ensGene.LENGTH0.1400.0120.155
danRer3.geneSymbol.LENGTH0.0760.0200.100
danRer3.refGene.LENGTH0.1400.0160.155
danRer4.ensGene.LENGTH0.1600.0000.162
danRer4.geneSymbol.LENGTH0.0920.0040.097
danRer4.genscan.LENGTH0.0840.0000.084
danRer4.nscanGene.LENGTH0.1120.0160.132
danRer4.refGene.LENGTH0.4120.0080.422
danRer5.ensGene.LENGTH0.1600.0000.161
danRer5.geneSymbol.LENGTH0.0760.0080.084
danRer5.refGene.LENGTH0.0640.0120.077
danRer5.vegaGene.LENGTH0.0560.0240.077
danRer5.vegaPseudoGene.LENGTH0.0040.0000.004
danRer6.ensGene.LENGTH0.1760.0160.200
danRer6.geneSymbol.LENGTH0.0760.0160.090
danRer6.refGene.LENGTH0.0640.0160.080
danRer6.xenoRefGene.LENGTH0.6640.0000.666
dm1.geneSymbol.LENGTH0.1360.0280.163
dm1.genscan.LENGTH0.0400.0040.043
dm1.refGene.LENGTH0.0760.0240.099
dm2.geneSymbol.LENGTH0.0920.0200.112
dm2.geneid.LENGTH0.0520.0160.067
dm2.genscan.LENGTH0.0280.0120.042
dm2.nscanGene.LENGTH0.0680.0000.066
dm2.refGene.LENGTH0.0880.0160.104
dm3.geneSymbol.LENGTH0.0880.0000.084
dm3.nscanPasaGene.LENGTH0.0600.0200.082
dm3.refGene.LENGTH0.0720.0000.071
dp2.genscan.LENGTH0.0360.0080.046
dp2.xenoRefGene.LENGTH0.2840.0000.287
dp3.geneid.LENGTH0.0400.0240.063
dp3.genscan.LENGTH0.0400.0040.042
dp3.xenoRefGene.LENGTH0.1720.0120.185
droAna1.geneid.LENGTH0.1760.0040.179
droAna1.genscan.LENGTH0.0280.0000.027
droAna1.xenoRefGene.LENGTH0.2440.0080.253
droAna2.genscan.LENGTH0.060.000.06
droAna2.xenoRefGene.LENGTH0.4200.0000.422
droEre1.genscan.LENGTH0.0440.0080.051
droEre1.xenoRefGene.LENGTH0.4200.0040.424
droGri1.genscan.LENGTH0.0560.0080.067
droGri1.xenoRefGene.LENGTH0.6570.0040.666
droMoj1.geneid.LENGTH0.1400.0120.152
droMoj1.genscan.LENGTH0.0640.0000.066
droMoj1.xenoRefGene.LENGTH0.2600.0160.280
droMoj2.genscan.LENGTH0.0520.0080.060
droMoj2.xenoRefGene.LENGTH0.4160.0000.456
droPer1.genscan.LENGTH0.0520.0120.065
droPer1.xenoRefGene.LENGTH0.3280.0080.349
droSec1.genscan.LENGTH0.3160.0120.338
droSec1.xenoRefGene.LENGTH0.3600.0000.357
droSim1.geneid.LENGTH0.0480.0160.066
droSim1.genscan.LENGTH0.0360.0040.046
droSim1.xenoRefGene.LENGTH0.2840.0000.329
droVir1.geneid.LENGTH0.1200.0040.130
droVir1.genscan.LENGTH0.0600.0080.070
droVir1.xenoRefGene.LENGTH0.3480.0000.348
droVir2.genscan.LENGTH0.0480.0120.060
droVir2.xenoRefGene.LENGTH0.3520.0080.366
droYak1.geneid.LENGTH0.0720.0160.088
droYak1.genscan.LENGTH0.0320.0200.052
droYak1.xenoRefGene.LENGTH0.3320.0000.333
droYak2.genscan.LENGTH0.0440.0080.050
droYak2.xenoRefGene.LENGTH0.3920.0040.396
equCab1.geneSymbol.LENGTH0.0080.0000.009
equCab1.geneid.LENGTH0.1160.0000.116
equCab1.nscanGene.LENGTH0.0520.0160.071
equCab1.refGene.LENGTH0.0080.0000.008
equCab1.sgpGene.LENGTH0.0880.0040.090
equCab2.ensGene.LENGTH0.1480.0080.157
equCab2.geneSymbol.LENGTH0.0120.0000.013
equCab2.nscanGene.LENGTH0.1080.0160.126
equCab2.refGene.LENGTH0.0120.0000.011
equCab2.xenoRefGene.LENGTH0.8120.0000.854
felCat3.ensGene.LENGTH0.4720.0040.482
felCat3.geneSymbol.LENGTH0.0040.0040.007
felCat3.geneid.LENGTH1.0360.0001.143
felCat3.genscan.LENGTH0.4680.0120.558
felCat3.nscanGene.LENGTH0.1040.0120.133
felCat3.refGene.LENGTH0.0000.0040.006
felCat3.sgpGene.LENGTH0.1600.0040.166
felCat3.xenoRefGene.LENGTH1.9120.0082.216
fr1.ensGene.LENGTH0.0880.0120.101
fr1.genscan.LENGTH0.0680.0040.071
fr2.ensGene.LENGTH0.2120.0080.220
galGal2.ensGene.LENGTH0.0640.0040.124
galGal2.geneSymbol.LENGTH0.0280.0000.028
galGal2.geneid.LENGTH0.0600.0080.068
galGal2.genscan.LENGTH0.0720.0160.087
galGal2.refGene.LENGTH0.3120.0120.325
galGal2.sgpGene.LENGTH0.0560.0200.078
galGal3.ensGene.LENGTH0.1000.0000.097
galGal3.geneSymbol.LENGTH0.0120.0120.026
galGal3.genscan.LENGTH0.0520.0280.082
galGal3.nscanGene.LENGTH0.0800.0000.077
galGal3.refGene.LENGTH0.0160.0040.022
galGal3.xenoRefGene.LENGTH0.5760.0000.609
gasAcu1.ensGene.LENGTH0.1120.0080.121
gasAcu1.nscanGene.LENGTH0.1080.0160.125
hg16.acembly.LENGTH0.4720.0000.514
hg16.ensGene.LENGTH0.0880.0000.088
hg16.exoniphy.LENGTH0.3160.0080.323
hg16.geneSymbol.LENGTH0.1360.0040.140
hg16.geneid.LENGTH0.2000.0240.250
hg16.genscan.LENGTH0.0760.0040.079
hg16.knownGene.LENGTH0.2160.0120.227
hg16.refGene.LENGTH0.1640.0080.171
hg16.sgpGene.LENGTH0.0720.0040.072
hg17.acembly.LENGTH0.9840.0121.004
hg17.acescan.LENGTH0.0120.0000.016
hg17.ccdsGene.LENGTH0.0280.0080.035
hg17.ensGene.LENGTH0.1360.0080.173
hg17.exoniphy.LENGTH0.5080.0080.531
hg17.geneSymbol.LENGTH0.1400.0000.142
hg17.geneid.LENGTH0.2000.0120.211
hg17.genscan.LENGTH0.0760.0040.080
hg17.knownGene.LENGTH0.1080.0240.130
hg17.refGene.LENGTH0.1120.0080.119
hg17.sgpGene.LENGTH0.4050.0280.433
hg17.vegaGene.LENGTH0.0520.0040.056
hg17.vegaPseudoGene.LENGTH0.0240.0000.025
hg17.xenoRefGene.LENGTH0.2560.0040.258
hg18.acembly.LENGTH0.5640.0000.581
hg18.acescan.LENGTH0.0080.0040.015
hg18.ccdsGene.LENGTH0.0440.0040.050
hg18.ensGene.LENGTH0.2920.0040.336
hg18.exoniphy.LENGTH0.7320.0040.738
hg18.geneSymbol.LENGTH0.1200.0080.128
hg18.geneid.LENGTH0.4240.0080.433
hg18.genscan.LENGTH0.0640.0040.070
hg18.knownGene.LENGTH0.1640.0040.170
hg18.knownGeneOld3.LENGTH0.0800.0080.087
hg18.refGene.LENGTH0.1000.0040.106
hg18.sgpGene.LENGTH0.0840.0080.093
hg18.sibGene.LENGTH0.4360.0000.437
hg18.xenoRefGene.LENGTH0.3920.0200.439
hg19.ccdsGene.LENGTH0.3800.0160.400
hg19.ensGene.LENGTH0.3760.0080.400
hg19.exoniphy.LENGTH0.4240.0040.452
hg19.geneSymbol.LENGTH0.1120.0120.127
hg19.knownGene.LENGTH0.2080.0120.225
hg19.nscanGene.LENGTH0.2440.0000.249
hg19.refGene.LENGTH0.1240.0000.149
hg19.xenoRefGene.LENGTH0.480.000.48
loxAfr3.xenoRefGene.LENGTH0.9960.0081.015
mm7.ensGene.LENGTH0.5280.0000.535
mm7.geneSymbol.LENGTH0.0960.0000.102
mm7.geneid.LENGTH0.0800.0200.101
mm7.genscan.LENGTH0.0720.0040.076
mm7.knownGene.LENGTH0.1080.0000.106
mm7.refGene.LENGTH0.0840.0000.086
mm7.sgpGene.LENGTH0.0720.0160.090
mm7.xenoRefGene.LENGTH0.3760.0040.383
mm8.ccdsGene.LENGTH0.0320.0000.033
mm8.ensGene.LENGTH0.0920.0000.089
mm8.geneSymbol.LENGTH0.1680.0000.167
mm8.geneid.LENGTH0.1000.0040.104
mm8.genscan.LENGTH0.0760.0000.074
mm8.knownGene.LENGTH0.1120.0040.113
mm8.nscanGene.LENGTH0.0720.0000.074
mm8.refGene.LENGTH0.0960.0000.112
mm8.sgpGene.LENGTH0.1000.0000.101
mm8.sibGene.LENGTH0.3480.0000.350
mm8.xenoRefGene.LENGTH0.6200.0120.649
mm9.acembly.LENGTH0.7720.0040.806
mm9.ccdsGene.LENGTH0.0360.0080.045
mm9.ensGene.LENGTH0.1920.0080.218
mm9.exoniphy.LENGTH0.5480.0040.566
mm9.geneSymbol.LENGTH0.2000.0000.206
mm9.geneid.LENGTH0.1040.0120.116
mm9.genscan.LENGTH0.0840.0000.082
mm9.knownGene.LENGTH0.1320.0160.147
mm9.nscanGene.LENGTH0.0760.0000.075
mm9.refGene.LENGTH0.4440.0040.454
mm9.sgpGene.LENGTH0.1080.0000.107
mm9.xenoRefGene.LENGTH0.4560.0080.482
monDom1.genscan.LENGTH0.0720.0080.080
monDom4.ensGene.LENGTH0.0920.0040.115
monDom4.geneSymbol.LENGTH0.0000.0040.006
monDom4.genscan.LENGTH0.0600.0240.086
monDom4.nscanGene.LENGTH0.0720.0200.091
monDom4.refGene.LENGTH0.0080.0000.007
monDom4.xenoRefGene.LENGTH0.5120.0000.556
monDom5.ensGene.LENGTH0.1520.0000.150
monDom5.geneSymbol.LENGTH0.0040.0040.007
monDom5.genscan.LENGTH0.0640.0040.069
monDom5.nscanGene.LENGTH0.1280.0000.128
monDom5.refGene.LENGTH0.0080.0000.006
monDom5.xenoRefGene.LENGTH0.8530.0000.858
ornAna1.ensGene.LENGTH0.1320.0160.146
ornAna1.geneSymbol.LENGTH0.0040.0000.005
ornAna1.refGene.LENGTH0.0040.0000.004
ornAna1.xenoRefGene.LENGTH0.800.000.82
oryLat2.ensGene.LENGTH0.1120.0040.127
oryLat2.geneSymbol.LENGTH0.0080.0000.007
oryLat2.refGene.LENGTH0.0040.0040.006
oryLat2.xenoRefGene.LENGTH0.9440.0040.991
panTro1.ensGene.LENGTH0.1160.0040.122
panTro1.geneid.LENGTH0.0680.0120.080
panTro1.genscan.LENGTH0.0720.0000.071
panTro1.xenoRefGene.LENGTH0.1440.0080.224
panTro2.ensGene.LENGTH0.1400.0080.174
panTro2.geneSymbol.LENGTH0.1360.0040.148
panTro2.genscan.LENGTH0.1440.0000.364
panTro2.nscanGene.LENGTH0.0800.0000.082
panTro2.refGene.LENGTH0.1560.0040.168
panTro2.xenoRefGene.LENGTH0.8080.0000.844
petMar1.xenoRefGene.LENGTH0.3560.0040.361
ponAbe2.ensGene.LENGTH0.1080.0120.807
ponAbe2.geneSymbol.LENGTH0.0120.0080.020
ponAbe2.genscan.LENGTH0.3760.0000.377
ponAbe2.nscanGene.LENGTH0.0640.0000.063
ponAbe2.refGene.LENGTH0.0120.0080.018
ponAbe2.xenoRefGene.LENGTH0.7520.0000.791
priPac1.xenoRefGene.LENGTH0.4040.0000.501
rheMac2.ensGene.LENGTH0.1440.0040.156
rheMac2.geneSymbol.LENGTH0.0000.0080.008
rheMac2.geneid.LENGTH0.1560.0000.226
rheMac2.nscanGene.LENGTH0.0720.0000.071
rheMac2.refGene.LENGTH0.0080.0000.008
rheMac2.sgpGene.LENGTH0.0800.0040.082
rheMac2.xenoRefGene.LENGTH0.6080.0000.620
rn3.ensGene.LENGTH0.1800.0240.206
rn3.geneSymbol.LENGTH0.0720.0160.130
rn3.geneid.LENGTH0.0600.0000.084
rn3.genscan.LENGTH0.0840.0000.085
rn3.knownGene.LENGTH0.0320.0080.041
rn3.nscanGene.LENGTH0.0720.0000.075
rn3.refGene.LENGTH0.0720.0120.083
rn3.sgpGene.LENGTH0.0720.0000.073
rn3.xenoRefGene.LENGTH1.0560.0001.074
rn4.ensGene.LENGTH0.1640.0000.164
rn4.geneSymbol.LENGTH0.0720.0120.084
rn4.geneid.LENGTH0.1120.0080.122
rn4.genscan.LENGTH0.0680.0120.082
rn4.knownGene.LENGTH0.0440.0040.048
rn4.nscanGene.LENGTH0.0840.0160.107
rn4.refGene.LENGTH0.0800.0120.094
rn4.sgpGene.LENGTH0.0960.0160.111
rn4.xenoRefGene.LENGTH0.4880.0000.506
sacCer1.ensGene.LENGTH0.0240.0080.032
sacCer2.ensGene.LENGTH0.0280.0040.032
strPur1.geneSymbol.LENGTH0.0040.0040.008
strPur1.genscan.LENGTH0.0840.0000.088
strPur1.refGene.LENGTH0.0080.0000.007
strPur1.xenoRefGene.LENGTH0.7320.0000.735
strPur2.geneSymbol.LENGTH0.0040.0000.007
strPur2.genscan.LENGTH0.1240.0000.124
strPur2.refGene.LENGTH0.0080.0000.007
strPur2.xenoRefGene.LENGTH0.7640.0040.784
supportedGeneIDs0.0640.0040.070
supportedGenomes0.1240.0040.229
taeGut1.ensGene.LENGTH0.0840.0000.084
taeGut1.geneSymbol.LENGTH0.0080.0000.006
taeGut1.genscan.LENGTH0.0440.0120.057
taeGut1.nscanGene.LENGTH0.0360.0080.045
taeGut1.refGene.LENGTH0.0000.0040.005
taeGut1.xenoRefGene.LENGTH0.5960.0000.597
tetNig1.ensGene.LENGTH0.1440.0200.165
tetNig1.geneid.LENGTH0.0800.0080.088
tetNig1.genscan.LENGTH0.0600.0240.084
tetNig1.nscanGene.LENGTH0.0880.0040.092
tetNig2.ensGene.LENGTH0.1600.0040.166
unfactor0.0080.0000.007
xenTro1.genscan.LENGTH0.0920.0040.100
xenTro2.ensGene.LENGTH0.4840.0080.493
xenTro2.geneSymbol.LENGTH0.0480.0080.055
xenTro2.genscan.LENGTH0.0960.0040.102
xenTro2.refGene.LENGTH0.0400.0080.048