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BioC experimental data: CHECK report for geneLenDataBase on petty

This page was generated on 2014-10-04 17:43:03 -0700 (Sat, 04 Oct 2014).

Package 84/197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
geneLenDataBase 1.0.0
Matthew Young , Nadia Davidson
Snapshot Date: 2014-10-04 07:15:22 -0700 (Sat, 04 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_2_14/experiment/pkgs/geneLenDataBase
Last Changed Rev: 2799 / Revision: 3055
Last Changed Date: 2014-04-11 14:27:08 -0700 (Fri, 11 Apr 2014)
zin2 Linux (Ubuntu 12.04.4 LTS) / x86_64  NotNeeded  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK [ WARNINGS ] OK 

Summary

Package: geneLenDataBase
Version: 1.0.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch geneLenDataBase_1.0.0.tar.gz
StartedAt: 2014-10-04 09:15:47 -0700 (Sat, 04 Oct 2014)
EndedAt: 2014-10-04 09:24:28 -0700 (Sat, 04 Oct 2014)
EllapsedTime: 521.4 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: geneLenDataBase.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch geneLenDataBase_1.0.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-2.14-data-experiment/meat/geneLenDataBase.Rcheck’
* using R version 3.1.1 (2014-07-10)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘geneLenDataBase/DESCRIPTION’ ... OK
* this is package ‘geneLenDataBase’ version ‘1.0.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘geneLenDataBase’ can be installed ... [29s/32s] OK
* checking installed package size ... NOTE
  installed size is 100.3Mb
  sub-directories of 1Mb or more:
    data  99.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
':::' call which should be '::': ‘GenomicFeatures:::supportedUCSCtables’
  See the note in ?`:::` about the use of this operator.
Unexported object imported by a ':::' call: ‘GenomicFeatures:::.UCSC_TXNAME2GENEID_MAPDEFS’
  See the note in ?`:::` about the use of this operator.
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... WARNING
Missing link or links in documentation object 'anoCar1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoCar1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoCar1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'aplCal1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'braFlo1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeJap1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caePb1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caePb2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeRem2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeRem3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cb1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cb3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.vegaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.vegaPseudoGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.nscanPasaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droEre1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droEre1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droGri1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droGri1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droPer1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droPer1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSec1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSec1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'gasAcu1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'gasAcu1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.acescan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.vegaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.vegaPseudoGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.acescan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.knownGeneOld3.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.sibGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'loxAfr3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.ensGene.LENGTH.Rd':
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Missing link or links in documentation object 'mm8.geneid.LENGTH.Rd':
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Missing link or links in documentation object 'mm8.geneSymbol.LENGTH.Rd':
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Missing link or links in documentation object 'mm8.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.sibGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'petMar1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'priPac1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'sacCer1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'sacCer2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

See the information in section 'Cross-references' of the 'Writing R
Extensions' manual.

* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [102s/103s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
  ‘/Users/biocbuild/bbs-2.14-data-experiment/meat/geneLenDataBase.Rcheck/00check.log’
for details.

geneLenDataBase.Rcheck/00install.out:

* installing *source* package ‘geneLenDataBase’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (geneLenDataBase)

geneLenDataBase.Rcheck/geneLenDataBase-Ex.timings:

nameusersystemelapsed
anoCar1.ensGene.LENGTH0.1460.0040.150
anoCar1.genscan.LENGTH0.0730.0030.076
anoCar1.xenoRefGene.LENGTH2.0130.0152.027
anoGam1.ensGene.LENGTH0.1710.0040.175
anoGam1.geneid.LENGTH0.1130.0030.116
anoGam1.genscan.LENGTH0.0650.0020.067
apiMel1.genscan.LENGTH0.4020.0010.404
apiMel2.ensGene.LENGTH0.1300.0010.132
apiMel2.geneid.LENGTH0.0640.0010.066
apiMel2.genscan.LENGTH0.0460.0010.048
aplCal1.xenoRefGene.LENGTH0.6680.0030.671
bosTau2.geneSymbol.LENGTH0.0740.0020.075
bosTau2.geneid.LENGTH0.4030.0050.409
bosTau2.genscan.LENGTH0.3240.0060.329
bosTau2.refGene.LENGTH0.0770.0010.079
bosTau2.sgpGene.LENGTH0.5750.0020.577
bosTau3.ensGene.LENGTH0.2120.0010.215
bosTau3.geneSymbol.LENGTH0.0620.0010.064
bosTau3.geneid.LENGTH0.2260.0030.230
bosTau3.genscan.LENGTH0.1130.0030.116
bosTau3.refGene.LENGTH0.0690.0020.072
bosTau3.sgpGene.LENGTH0.2600.0040.265
bosTau4.ensGene.LENGTH0.2230.0020.225
bosTau4.geneSymbol.LENGTH0.0520.0020.053
bosTau4.genscan.LENGTH0.1050.0010.107
bosTau4.nscanGene.LENGTH0.0490.0020.051
bosTau4.refGene.LENGTH0.0570.0010.060
braFlo1.xenoRefGene.LENGTH1.1190.0091.128
caeJap1.xenoRefGene.LENGTH0.5780.0060.584
caePb1.xenoRefGene.LENGTH0.8220.0080.830
caePb2.xenoRefGene.LENGTH0.8290.0070.835
caeRem2.xenoRefGene.LENGTH0.6670.0040.671
caeRem3.xenoRefGene.LENGTH0.6380.0050.643
calJac1.genscan.LENGTH0.1320.0020.133
calJac1.nscanGene.LENGTH0.1900.0020.191
calJac1.xenoRefGene.LENGTH1.3940.0101.404
canFam1.ensGene.LENGTH0.5850.0030.590
canFam1.geneSymbol.LENGTH0.0130.0010.013
canFam1.genscan.LENGTH0.1020.0020.104
canFam1.nscanGene.LENGTH0.0910.0020.093
canFam1.refGene.LENGTH0.0100.0010.011
canFam1.xenoRefGene.LENGTH1.0220.0041.026
canFam2.ensGene.LENGTH0.2580.0020.260
canFam2.geneSymbol.LENGTH0.0110.0010.012
canFam2.genscan.LENGTH0.0990.0020.100
canFam2.nscanGene.LENGTH0.0990.0010.100
canFam2.refGene.LENGTH0.0100.0000.011
canFam2.xenoRefGene.LENGTH1.0640.0031.067
cavPor3.ensGene.LENGTH0.5160.0020.517
cavPor3.genscan.LENGTH0.1410.0020.142
cavPor3.nscanGene.LENGTH0.0990.0010.100
cavPor3.xenoRefGene.LENGTH1.0320.0051.036
cb1.xenoRefGene.LENGTH0.7560.0030.759
cb3.xenoRefGene.LENGTH0.9690.0050.974
ce2.geneSymbol.LENGTH0.1130.0010.115
ce2.geneid.LENGTH0.1050.0010.107
ce2.refGene.LENGTH0.1070.0010.109
ce4.geneSymbol.LENGTH0.1130.0020.116
ce4.refGene.LENGTH0.0950.0010.098
ce4.xenoRefGene.LENGTH0.1160.0010.118
ce6.ensGene.LENGTH0.1420.0020.142
ce6.geneSymbol.LENGTH0.1110.0010.112
ce6.refGene.LENGTH0.1040.0020.106
ce6.xenoRefGene.LENGTH0.1440.0020.146
ci1.geneSymbol.LENGTH0.0110.0010.012
ci1.refGene.LENGTH0.0100.0010.011
ci1.xenoRefGene.LENGTH0.3630.0050.368
ci2.ensGene.LENGTH0.0930.0010.094
ci2.geneSymbol.LENGTH0.0110.0010.012
ci2.refGene.LENGTH0.0100.0010.011
ci2.xenoRefGene.LENGTH0.5400.0050.545
danRer3.ensGene.LENGTH0.2280.0010.231
danRer3.geneSymbol.LENGTH0.0850.0010.087
danRer3.refGene.LENGTH0.0780.0020.080
danRer4.ensGene.LENGTH0.6230.0020.625
danRer4.geneSymbol.LENGTH0.0800.0020.081
danRer4.genscan.LENGTH0.0880.0010.090
danRer4.nscanGene.LENGTH0.1280.0010.129
danRer4.refGene.LENGTH0.0740.0010.075
danRer5.ensGene.LENGTH0.1870.0010.189
danRer5.geneSymbol.LENGTH0.0910.0020.092
danRer5.refGene.LENGTH0.0770.0010.078
danRer5.vegaGene.LENGTH0.0840.0020.085
danRer5.vegaPseudoGene.LENGTH0.0080.0010.008
danRer6.ensGene.LENGTH0.2170.0020.220
danRer6.geneSymbol.LENGTH0.0920.0010.094
danRer6.refGene.LENGTH0.0860.0020.087
danRer6.xenoRefGene.LENGTH0.9070.0080.916
dm1.geneSymbol.LENGTH0.1010.0020.102
dm1.genscan.LENGTH0.1670.0020.168
dm1.refGene.LENGTH0.0920.0010.093
dm2.geneSymbol.LENGTH0.1000.0010.101
dm2.geneid.LENGTH0.0620.0010.063
dm2.genscan.LENGTH0.0400.0020.042
dm2.nscanGene.LENGTH0.0760.0010.078
dm2.refGene.LENGTH0.0880.0010.089
dm3.geneSymbol.LENGTH0.1020.0020.103
dm3.nscanPasaGene.LENGTH0.0810.0030.083
dm3.refGene.LENGTH0.1480.0030.151
dp2.genscan.LENGTH0.0550.0010.056
dp2.xenoRefGene.LENGTH0.3840.0030.387
dp3.geneid.LENGTH0.1400.0030.143
dp3.genscan.LENGTH0.0450.0020.046
dp3.xenoRefGene.LENGTH0.2080.0020.210
droAna1.geneid.LENGTH0.1090.0040.114
droAna1.genscan.LENGTH0.4820.0020.484
droAna1.xenoRefGene.LENGTH0.3740.0020.376
droAna2.genscan.LENGTH0.0760.0010.078
droAna2.xenoRefGene.LENGTH0.4640.0060.469
droEre1.genscan.LENGTH0.0490.0010.050
droEre1.xenoRefGene.LENGTH0.3780.0050.382
droGri1.genscan.LENGTH0.0900.0020.092
droGri1.xenoRefGene.LENGTH0.4280.0020.430
droMoj1.geneid.LENGTH0.1770.0010.179
droMoj1.genscan.LENGTH0.0830.0020.085
droMoj1.xenoRefGene.LENGTH0.3950.0030.396
droMoj2.genscan.LENGTH0.0560.0010.057
droMoj2.xenoRefGene.LENGTH0.4290.0020.431
droPer1.genscan.LENGTH0.0610.0010.063
droPer1.xenoRefGene.LENGTH0.4680.0020.471
droSec1.genscan.LENGTH0.0460.0010.047
droSec1.xenoRefGene.LENGTH0.4670.0020.468
droSim1.geneid.LENGTH0.0630.0010.064
droSim1.genscan.LENGTH0.0390.0010.040
droSim1.xenoRefGene.LENGTH0.3480.0020.350
droVir1.geneid.LENGTH0.1910.0010.192
droVir1.genscan.LENGTH0.0630.0010.064
droVir1.xenoRefGene.LENGTH0.4650.0020.467
droVir2.genscan.LENGTH0.0580.0010.058
droVir2.xenoRefGene.LENGTH0.7680.0020.770
droYak1.geneid.LENGTH0.0670.0010.067
droYak1.genscan.LENGTH0.0460.0010.047
droYak1.xenoRefGene.LENGTH0.3670.0020.369
droYak2.genscan.LENGTH0.0450.0010.047
droYak2.xenoRefGene.LENGTH0.4980.0040.503
equCab1.geneSymbol.LENGTH0.0120.0010.012
equCab1.geneid.LENGTH0.1760.0020.179
equCab1.nscanGene.LENGTH0.0640.0010.066
equCab1.refGene.LENGTH0.0110.0010.012
equCab1.sgpGene.LENGTH0.1050.0020.107
equCab2.ensGene.LENGTH0.1500.0020.152
equCab2.geneSymbol.LENGTH0.0150.0010.016
equCab2.nscanGene.LENGTH0.0770.0020.078
equCab2.refGene.LENGTH0.0120.0010.014
equCab2.xenoRefGene.LENGTH1.3670.0071.375
felCat3.ensGene.LENGTH0.1660.0020.168
felCat3.geneSymbol.LENGTH0.0090.0010.009
felCat3.geneid.LENGTH1.2840.0111.295
felCat3.genscan.LENGTH0.7550.0040.759
felCat3.nscanGene.LENGTH0.1210.0010.122
felCat3.refGene.LENGTH0.0090.0010.242
felCat3.sgpGene.LENGTH0.2030.0020.204
felCat3.xenoRefGene.LENGTH2.2890.0142.302
fr1.ensGene.LENGTH0.1220.0010.123
fr1.genscan.LENGTH0.0870.0020.088
fr2.ensGene.LENGTH0.1990.0010.200
galGal2.ensGene.LENGTH0.1310.0020.133
galGal2.geneSymbol.LENGTH0.0270.0010.028
galGal2.geneid.LENGTH0.0650.0010.066
galGal2.genscan.LENGTH0.0800.0010.080
galGal2.refGene.LENGTH0.0270.0010.027
galGal2.sgpGene.LENGTH0.0710.0010.073
galGal3.ensGene.LENGTH0.2070.0030.210
galGal3.geneSymbol.LENGTH0.0300.0010.031
galGal3.genscan.LENGTH0.0830.0020.085
galGal3.nscanGene.LENGTH0.1110.0010.114
galGal3.refGene.LENGTH0.0250.0010.026
galGal3.xenoRefGene.LENGTH1.1390.0071.146
gasAcu1.ensGene.LENGTH0.1390.0010.141
gasAcu1.nscanGene.LENGTH0.1370.0020.139
hg16.acembly.LENGTH0.5150.0040.519
hg16.ensGene.LENGTH0.1030.0010.105
hg16.exoniphy.LENGTH0.4450.0050.450
hg16.geneSymbol.LENGTH0.1650.0030.168
hg16.geneid.LENGTH0.0850.0030.088
hg16.genscan.LENGTH0.0950.0030.099
hg16.knownGene.LENGTH0.2800.0040.284
hg16.refGene.LENGTH0.1560.0020.159
hg16.sgpGene.LENGTH0.0870.0020.090
hg17.acembly.LENGTH1.7050.0121.718
hg17.acescan.LENGTH0.0170.0000.018
hg17.ccdsGene.LENGTH0.0350.0000.036
hg17.ensGene.LENGTH0.1580.0010.159
hg17.exoniphy.LENGTH0.5590.0050.564
hg17.geneSymbol.LENGTH0.2250.0010.226
hg17.geneid.LENGTH0.1100.0010.111
hg17.genscan.LENGTH0.0960.0010.097
hg17.knownGene.LENGTH0.1730.0030.175
hg17.refGene.LENGTH0.1460.0020.148
hg17.sgpGene.LENGTH0.5920.0050.596
hg17.vegaGene.LENGTH0.0580.0010.059
hg17.vegaPseudoGene.LENGTH0.0270.0010.028
hg17.xenoRefGene.LENGTH0.3470.0030.351
hg18.acembly.LENGTH0.6660.0060.673
hg18.acescan.LENGTH0.0170.0010.018
hg18.ccdsGene.LENGTH0.0550.0010.056
hg18.ensGene.LENGTH0.4430.0020.447
hg18.exoniphy.LENGTH0.9220.0030.927
hg18.geneSymbol.LENGTH0.1730.0010.175
hg18.geneid.LENGTH0.1180.0010.120
hg18.genscan.LENGTH0.5710.0020.573
hg18.knownGene.LENGTH0.2090.0020.211
hg18.knownGeneOld3.LENGTH0.1040.0020.106
hg18.refGene.LENGTH0.1590.0020.161
hg18.sgpGene.LENGTH0.1230.0020.126
hg18.sibGene.LENGTH0.5040.0030.506
hg18.xenoRefGene.LENGTH0.6400.0040.643
hg19.ccdsGene.LENGTH0.0620.0010.063
hg19.ensGene.LENGTH0.6610.0030.665
hg19.exoniphy.LENGTH0.8610.0050.867
hg19.geneSymbol.LENGTH0.1600.0020.162
hg19.knownGene.LENGTH0.7520.0020.753
hg19.nscanGene.LENGTH0.1980.0020.199
hg19.refGene.LENGTH0.1330.0010.134
hg19.xenoRefGene.LENGTH0.5180.0030.522
loxAfr3.xenoRefGene.LENGTH1.1870.0071.194
mm7.ensGene.LENGTH0.1950.0010.196
mm7.geneSymbol.LENGTH0.1360.0010.136
mm7.geneid.LENGTH0.1190.0010.121
mm7.genscan.LENGTH0.2580.0030.260
mm7.knownGene.LENGTH0.1650.0020.166
mm7.refGene.LENGTH0.1250.0020.126
mm7.sgpGene.LENGTH0.1160.0010.118
mm7.xenoRefGene.LENGTH0.4990.0020.502
mm8.ccdsGene.LENGTH0.0350.0010.036
mm8.ensGene.LENGTH0.1290.0020.130
mm8.geneSymbol.LENGTH0.1360.0020.138
mm8.geneid.LENGTH0.1880.0020.191
mm8.genscan.LENGTH0.0870.0020.088
mm8.knownGene.LENGTH0.1230.0010.125
mm8.nscanGene.LENGTH0.0950.0020.096
mm8.refGene.LENGTH0.1330.0010.135
mm8.sgpGene.LENGTH0.1130.0010.115
mm8.sibGene.LENGTH0.5270.0040.531
mm8.xenoRefGene.LENGTH1.1680.0041.172
mm9.acembly.LENGTH0.4960.0030.500
mm9.ccdsGene.LENGTH0.0450.0010.047
mm9.ensGene.LENGTH0.2720.0030.275
mm9.exoniphy.LENGTH0.7250.0040.729
mm9.geneSymbol.LENGTH0.2990.0010.301
mm9.geneid.LENGTH0.1350.0010.136
mm9.genscan.LENGTH0.1040.0020.105
mm9.knownGene.LENGTH0.1590.0020.160
mm9.nscanGene.LENGTH0.6030.0030.606
mm9.refGene.LENGTH0.1060.0010.108
mm9.sgpGene.LENGTH0.1180.0010.119
mm9.xenoRefGene.LENGTH0.4990.0030.502
monDom1.genscan.LENGTH0.0930.0010.095
monDom4.ensGene.LENGTH0.1230.0010.125
monDom4.geneSymbol.LENGTH0.0140.0010.015
monDom4.genscan.LENGTH0.0780.0020.081
monDom4.nscanGene.LENGTH0.0810.0020.083
monDom4.refGene.LENGTH0.0090.0010.009
monDom4.xenoRefGene.LENGTH0.7420.0080.750
monDom5.ensGene.LENGTH0.1870.0040.192
monDom5.geneSymbol.LENGTH0.0090.0010.009
monDom5.genscan.LENGTH0.0850.0010.087
monDom5.nscanGene.LENGTH0.1780.0010.181
monDom5.refGene.LENGTH0.0090.0010.009
monDom5.xenoRefGene.LENGTH1.0530.0051.058
ornAna1.ensGene.LENGTH0.1810.0020.183
ornAna1.geneSymbol.LENGTH0.0100.0010.012
ornAna1.refGene.LENGTH0.0080.0010.008
ornAna1.xenoRefGene.LENGTH1.4200.0061.426
oryLat2.ensGene.LENGTH0.1330.0010.134
oryLat2.geneSymbol.LENGTH0.0090.0000.010
oryLat2.refGene.LENGTH0.0080.0000.010
oryLat2.xenoRefGene.LENGTH0.8170.0050.822
panTro1.ensGene.LENGTH0.1420.0010.143
panTro1.geneid.LENGTH0.0750.0010.077
panTro1.genscan.LENGTH0.1670.0020.170
panTro1.xenoRefGene.LENGTH0.1920.0010.193
panTro2.ensGene.LENGTH0.1880.0020.190
panTro2.geneSymbol.LENGTH0.1580.0020.160
panTro2.genscan.LENGTH0.0880.0020.089
panTro2.nscanGene.LENGTH0.0940.0020.095
panTro2.refGene.LENGTH0.3020.0040.306
panTro2.xenoRefGene.LENGTH0.8140.0070.820
petMar1.xenoRefGene.LENGTH0.4520.0040.457
ponAbe2.ensGene.LENGTH0.1260.0020.127
ponAbe2.geneSymbol.LENGTH0.0210.0000.021
ponAbe2.genscan.LENGTH0.1530.0010.154
ponAbe2.nscanGene.LENGTH0.0920.0010.094
ponAbe2.refGene.LENGTH0.0240.0010.025
ponAbe2.xenoRefGene.LENGTH1.2240.0091.232
priPac1.xenoRefGene.LENGTH1.0620.0041.066
rheMac2.ensGene.LENGTH0.1870.0020.188
rheMac2.geneSymbol.LENGTH0.0100.0000.011
rheMac2.geneid.LENGTH0.1020.0010.103
rheMac2.nscanGene.LENGTH0.0850.0010.086
rheMac2.refGene.LENGTH0.0100.0010.010
rheMac2.sgpGene.LENGTH0.1040.0010.106
rheMac2.xenoRefGene.LENGTH0.7590.0040.764
rn3.ensGene.LENGTH0.2290.0020.231
rn3.geneSymbol.LENGTH0.0770.0010.078
rn3.geneid.LENGTH0.0740.0010.075
rn3.genscan.LENGTH0.0920.0010.093
rn3.knownGene.LENGTH0.0360.0000.036
rn3.nscanGene.LENGTH0.0890.0010.091
rn3.refGene.LENGTH0.0770.0010.079
rn3.sgpGene.LENGTH0.0860.0010.088
rn3.xenoRefGene.LENGTH0.9390.0060.946
rn4.ensGene.LENGTH0.4140.0020.415
rn4.geneSymbol.LENGTH0.0820.0010.083
rn4.geneid.LENGTH0.1360.0020.139
rn4.genscan.LENGTH0.0930.0010.095
rn4.knownGene.LENGTH0.0380.0010.038
rn4.nscanGene.LENGTH0.0840.0020.084
rn4.refGene.LENGTH0.0740.0010.075
rn4.sgpGene.LENGTH0.1200.0020.122
rn4.xenoRefGene.LENGTH0.6210.0040.625
sacCer1.ensGene.LENGTH0.0360.0010.037
sacCer2.ensGene.LENGTH0.0310.0010.032
strPur1.geneSymbol.LENGTH0.0100.0010.011
strPur1.genscan.LENGTH0.1080.0030.111
strPur1.refGene.LENGTH0.0120.0010.013
strPur1.xenoRefGene.LENGTH0.8650.0060.872
strPur2.geneSymbol.LENGTH0.0090.0000.010
strPur2.genscan.LENGTH0.6690.0020.671
strPur2.refGene.LENGTH0.0090.0010.010
strPur2.xenoRefGene.LENGTH1.0560.0051.061
supportedGeneIDs0.0230.0020.025
supportedGenomes0.1780.0060.681
taeGut1.ensGene.LENGTH0.0980.0010.099
taeGut1.geneSymbol.LENGTH0.0070.0010.008
taeGut1.genscan.LENGTH0.0480.0010.049
taeGut1.nscanGene.LENGTH0.0440.0010.046
taeGut1.refGene.LENGTH0.0070.0010.008
taeGut1.xenoRefGene.LENGTH0.6340.0040.637
tetNig1.ensGene.LENGTH0.1200.0010.120
tetNig1.geneid.LENGTH0.0960.0010.097
tetNig1.genscan.LENGTH0.0800.0010.081
tetNig1.nscanGene.LENGTH0.1060.0020.108
tetNig2.ensGene.LENGTH0.1120.0010.114
unfactor0.0750.0030.077
xenTro1.genscan.LENGTH0.1240.0010.125
xenTro2.ensGene.LENGTH0.1370.0010.137
xenTro2.geneSymbol.LENGTH0.2040.0020.205
xenTro2.genscan.LENGTH0.1110.0010.112
xenTro2.refGene.LENGTH0.0490.0010.049