BioC experimental data: CHECK report for ChAMPdata on petty

Package: ChAMPdata

Version: 1.0.1

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch ChAMPdata_1.0.1.tar.gz

StartedAt: 2014-10-04 08:57:26 -0700 (Sat, 04 Oct 2014)

EndedAt: 2014-10-04 08:59:56 -0700 (Sat, 04 Oct 2014)

EllapsedTime: 150.4 seconds

RetCode: 0

Status:  OK

CheckDir: ChAMPdata.Rcheck

Warnings: 0

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch ChAMPdata_1.0.1.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-2.14-data-experiment/meat/ChAMPdata.Rcheck’
* using R version 3.1.1 (2014-07-10)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ChAMPdata/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ChAMPdata’ version ‘1.0.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ChAMPdata’ can be installed ... [2s/6s] OK
* checking installed package size ... NOTE
  installed size is 235.4Mb
  sub-directories of 1Mb or more:
    data     111.8Mb
    extdata  123.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: bloodCtl.Rd:162-164: Dropping empty section \details
prepare_Rd: bloodCtl.Rd:165-167: Dropping empty section \source
prepare_Rd: bloodCtl.Rd:168-170: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [50s/50s] OK
Examples with CPU or elapsed time > 5s
                    user system elapsed
ChAMPdata-package 32.679  0.697  33.379
testDataSet       12.181  0.163  12.345
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  ‘/Users/biocbuild/bbs-2.14-data-experiment/meat/ChAMPdata.Rcheck/00check.log’
for details.

* installing *source* package ‘ChAMPdata’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (ChAMPdata)

name	user	system	elapsed
ChAMPdata-package	32.679	0.697	33.379
bloodCtl	0.004	0.001	0.041
probe.features	2.635	0.196	2.832
probeInfoALL.lv	0.603	0.045	0.648
testDataSet	12.181	0.163	12.345