BioC experimental data: CHECK report for colonCA on moscato2

Package: colonCA

Version: 1.4.11

Command: rm -rf colonCA.buildbin-libdir && mkdir colonCA.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=colonCA.buildbin-libdir colonCA_1.4.11.tar.gz >colonCA-install.out 2>&1 && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD check --library=colonCA.buildbin-libdir --install="check:colonCA-install.out" --force-multiarch --no-vignettes --timings colonCA_1.4.11.tar.gz && mv colonCA.buildbin-libdir/* colonCA.Rcheck/ && rmdir colonCA.buildbin-libdir

StartedAt: 2013-10-08 13:05:04 -0700 (Tue, 08 Oct 2013)

EndedAt: 2013-10-08 13:07:45 -0700 (Tue, 08 Oct 2013)

EllapsedTime: 160.9 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: colonCA.Rcheck

Warnings: 1

* using log directory 'E:/biocbld/bbs-2.12-data-experiment/meat/colonCA.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'colonCA/DESCRIPTION' ... OK
* this is package 'colonCA' version '1.4.11'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'colonCA' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
              old_size new_size compress
  colonCA.rda    788Kb    300Kb       xz
* checking examples ...
** running examples for arch 'i386' ... [2s] OK
** running examples for arch 'x64' ... [2s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
See
  'E:/biocbld/bbs-2.12-data-experiment/meat/colonCA.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'colonCA' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'colonCA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'colonCA' as colonCA_1.4.11.zip
* DONE (colonCA)