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Package 214/609HostnameOS / ArchBUILDCHECKBUILD BIN
flowViz 1.22.0
Mike Jiang
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/flowViz
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: flowViz
Version: 1.22.0
Command: rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=flowViz.buildbin-libdir flowViz_1.22.0.tar.gz >flowViz-install.out 2>&1 && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD check --library=flowViz.buildbin-libdir --install="check:flowViz-install.out" --force-multiarch --no-vignettes --timings flowViz_1.22.0.tar.gz && mv flowViz.buildbin-libdir/* flowViz.Rcheck/ && rmdir flowViz.buildbin-libdir
StartedAt: 2013-03-25 00:59:31 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 01:04:33 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 302.1 seconds
RetCode: 0
Status:  OK  
CheckDir: flowViz.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.11-bioc/meat/flowViz.Rcheck'
* using R version 2.15.3 (2013-03-01)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'flowViz/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowViz' version '1.22.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'flowViz' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  9.5Mb
  sub-directories of 1Mb or more:
    doc   9.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
gltext: no visible global function definition for 'unit'
gltext: no visible global function definition for 'gpar'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
                        user system elapsed
xyplot                 25.77   0.20   26.30
splom                  15.00   0.11   15.42
densityplot            14.34   0.35   14.75
ecdfplot               14.51   0.14   14.77
latticeMethods-flowSet 13.58   0.30   13.87
timeLinePlot-methods    9.64   0.03    9.68
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
                        user system elapsed
xyplot                 26.77   0.07   28.41
ecdfplot               16.35   0.20   16.71
latticeMethods-flowSet 13.57   0.22   13.79
splom                  13.34   0.04   13.40
densityplot            10.65   0.44   11.09
timeLinePlot-methods    8.83   0.07    9.28
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'D:/biocbld/bbs-2.11-bioc/meat/flowViz.Rcheck/00check.log'
for details.

flowViz.Rcheck/00install.out:


install for i386

* installing *source* package 'flowViz' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'filters.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'flowViz' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowViz' as flowViz_1.22.0.zip

* DONE (flowViz)