Package: GSVAdata

Version: 0.99.8

Command: /home/biocbuild/bbs-2.10-bioc/R/bin/R CMD check --no-vignettes --timings GSVAdata_0.99.8.tar.gz

StartedAt: 2012-09-23 13:05:47 -0700 (Sun, 23 Sep 2012)

EndedAt: 2012-09-23 13:06:56 -0700 (Sun, 23 Sep 2012)

EllapsedTime: 69.6 seconds

RetCode: 0

Status:  OK

CheckDir: GSVAdata.Rcheck

Warnings: 0

* using log directory ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/GSVAdata.Rcheck’
* using R version 2.15.1 (2012-06-22)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘GSVAdata/DESCRIPTION’ ... OK
* this is package ‘GSVAdata’ version ‘0.99.8’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘GSVAdata’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 12.8Mb
  sub-directories of 1Mb or more:
    data  12.7Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/GSVAdata.Rcheck/00check.log’
for details.

* installing *source* package ‘GSVAdata’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (GSVAdata)

name	user	system	elapsed
annotEntrez220212	0.052	0.000	0.050
brainTxDbSets	0.004	0.000	0.005
c2BroadSets	5.252	0.092	5.345
commonPickrellHuang	0.408	0.012	0.420
gbm_VerhaakEtAl	0.424	0.036	0.458
genderGenesEntrez	0.004	0.000	0.002
leukemia	0.276	0.012	0.290