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Package 279/553HostnameOS / ArchBUILDCHECKBUILD BIN
IdMappingRetrieval 1.2.0
Alex Lisovich , Roger Day
Snapshot Date: 2012-09-23 17:01:39 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/IdMappingRetrieval
Last Changed Rev: 68113 / Revision: 69725
Last Changed Date: 2012-07-31 10:54:34 -0700 (Tue, 31 Jul 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: IdMappingRetrieval
Version: 1.2.0
Command: rm -rf IdMappingRetrieval.buildbin-libdir && mkdir IdMappingRetrieval.buildbin-libdir && E:\biocbld\bbs-2.10-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=IdMappingRetrieval.buildbin-libdir IdMappingRetrieval_1.2.0.tar.gz >IdMappingRetrieval-install.out 2>&1 && E:\biocbld\bbs-2.10-bioc\R\bin\R.exe CMD check --library=IdMappingRetrieval.buildbin-libdir --install="check:IdMappingRetrieval-install.out" --force-multiarch --no-vignettes --timings IdMappingRetrieval_1.2.0.tar.gz && mv IdMappingRetrieval.buildbin-libdir/* IdMappingRetrieval.Rcheck/ && rmdir IdMappingRetrieval.buildbin-libdir
StartedAt: 2012-09-24 01:12:41 -0700 (Mon, 24 Sep 2012)
EndedAt: 2012-09-24 01:15:43 -0700 (Mon, 24 Sep 2012)
EllapsedTime: 182.7 seconds
RetCode: 0
Status:  OK  
CheckDir: IdMappingRetrieval.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.10-bioc/meat/IdMappingRetrieval.Rcheck'
* using R version 2.15.1 (2012-06-22)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'IdMappingRetrieval/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'IdMappingRetrieval' version '1.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'IdMappingRetrieval' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... NOTE
The following files should probably not be installed:
  'IdMappingRetrieval.lyx'

Consider the use of a .Rinstignore file: see 'Writing R Extensions',
or move the vignette sources from 'inst/doc' to 'vignettes'.
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.10-bioc/meat/IdMappingRetrieval.Rcheck/00check.log'
for details.

IdMappingRetrieval.Rcheck/00install.out:


install for i386

* installing *source* package 'IdMappingRetrieval' ...
** R
** demo
** inst
** preparing package for lazy loading
This is  ENVISIONQuery   1.4.0   2011-07-17 
Warning in setGenericS3.default(name, export = exportGeneric, envir = envir,  :
  Renamed the preexisting function getServices to getServices.default, which was defined in environment ENVISIONQuery.
** help
*** installing help indices
** building package indices
** installing vignettes
   'IdMappingRetrieval.Rnw' using 'latin-9' 
** testing if installed package can be loaded
This is  ENVISIONQuery   1.4.0   2011-07-17 

install for x64

* installing *source* package 'IdMappingRetrieval' ...
** testing if installed package can be loaded
This is  ENVISIONQuery   1.4.0   2011-07-17 
* MD5 sums
packaged installation of 'IdMappingRetrieval' as IdMappingRetrieval_1.2.0.zip

* DONE (IdMappingRetrieval)