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Package 275/553HostnameOS / ArchBUILDCHECKBUILD BIN
Icens 1.28.0
Bioconductor Package Maintainer
Snapshot Date: 2012-09-23 17:01:39 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/Icens
Last Changed Rev: 64678 / Revision: 69725
Last Changed Date: 2012-03-30 15:05:02 -0700 (Fri, 30 Mar 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: Icens
Version: 1.28.0
Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch Icens_1.28.0.tar.gz
StartedAt: 2012-09-24 00:37:06 -0700 (Mon, 24 Sep 2012)
EndedAt: 2012-09-24 00:37:51 -0700 (Mon, 24 Sep 2012)
EllapsedTime: 45.2 seconds
RetCode: 0
Status:  OK 
CheckDir: Icens.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.10-bioc/meat/Icens.Rcheck'
* using R version 2.15.1 (2012-06-22)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'Icens/DESCRIPTION' ... OK
* this is package 'Icens' version '1.28.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'Icens' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
VEMICMmac: no visible binding for global variable 'EMstep'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
  Running 'testbv.R'
  Comparing 'testbv.Rout' to 'testbv.Rout.save' ...117c117
<  [6]  1.461001e+00  1.207129e+00  1.000000e+00  4.748624e-01 -2.640501e-16
---
>  [6]  1.461001e+00  1.207129e+00  1.000000e+00  4.748624e-01 -2.480201e-16
 OK
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  '/Users/biocbuild/bbs-2.10-bioc/meat/Icens.Rcheck/00check.log'
for details.

Icens.Rcheck/00install.out:

* installing *source* package 'Icens' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (Icens)

Icens.Rcheck/Icens-Ex.timings:

nameusersystemelapsed
BVcliques0.4430.0060.451
BVclmat3.2510.0053.257
BVsupport3.0150.0063.021
EM0.1180.0070.125
EMICM0.1120.0020.114
ISDM9.8480.0059.855
MLEintvl0.0430.0000.043
Maclist0.0190.0000.020
Macmat0.0210.0010.021
PGM0.1900.0040.194
Plotboxes0.0730.0020.077
VEM0.1770.0010.179
cmv0.0040.0010.006
cosmesis0.0020.0010.002
hiv0.0080.0030.012
plot.icsurv0.4420.0070.449
pruitt0.0020.0010.002