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Package 27/55HostnameOS / ArchBUILDCHECKBUILD BIN
harbChIP 0.0.4
VJ Carey
Snapshot Date: 2008-04-10 00:02:38 -0700 (Thu, 10 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/harbChIP
Last Changed Rev: 564 / Revision: 624
Last Changed Date: 2008-02-19 02:52:25 -0800 (Tue, 19 Feb 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: harbChIP
Version: 0.0.4
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check harbChIP_0.0.4.tar.gz
StartedAt: 2008-04-10 03:08:31 -0700 (Thu, 10 Apr 2008)
EndedAt: 2008-04-10 03:10:17 -0700 (Thu, 10 Apr 2008)
EllapsedTime: 105.9 seconds
RetCode: 0
Status: OK
CheckDir: harbChIP.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-data-experiment/meat/harbChIP.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'harbChIP/DESCRIPTION' ... OK
* this is package 'harbChIP' version '0.0.4'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'harbChIP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
chkAllUS: no visible binding for global variable 'sceUpstr'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating harbChIP-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating harbChIP-manual.tex ... OK
* checking harbChIP-manual.tex ... OK

harbChIP.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-2.1-data-experiment/meat/harbChIP.Rcheck


---------- Making package harbChIP ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
Loading required package: methods
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'harbChIP'
     Formats: text html latex example chm 
  allhex                            text    html    latex   example chm
  buildUpstreamSeqs2                text    html    latex   example chm
  chkMotif4TF                       text    html    latex   example chm
  harbChIP                          text    html    latex   example chm
  sceUpstream                       text    html    latex   example chm
  upstreamSeqs-class                text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.1-data-experiment\meat\harbChIP.Rcheck\00_pkg_src\harbChIP\chm\harbChIP.chm


Compile time: 0 minutes, 0 seconds
7	Topics
24	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-2.1-data-experiment\meat\harbChIP.Rcheck\00_pkg_src\harbChIP\chm\harbChIP.chm, 20,931 bytes
Compression decreased file by 1,487 bytes.
  adding MD5 sums

* DONE (harbChIP)