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Package 33/233HostnameOS / ArchBUILDCHECKBUILD BIN
biocViews 1.6.1
Biocore Team c/o BioC user list
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/biocViews
Last Changed Rev: 28916 / Revision: 30966
Last Changed Date: 2007-11-26 15:13:12 -0800 (Mon, 26 Nov 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: biocViews
Version: 1.6.1
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=biocViews.buildbin-libdir biocViews_1.6.1.tar.gz
StartedAt: 2008-04-09 22:50:49 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 22:51:48 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 58.3 seconds
RetCode: 0
Status: OK
PackageFile: biocViews_1.6.1.zip
PackageFileSize: 275.8 KiB

Command output

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/biocViews.buildbin-libdir

Using auto-selected zip options ' biocViews-HELP=ziponly'

---------- Making package biocViews ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'biocViews'
     Formats: text html latex example chm 
  BiocView-class                    text    html    latex           chm
  Htmlized-class                    text    html    latex           chm
  PackageDetail-class               text    html    latex   example chm
  RepositoryDetail-class            text    html    latex           chm
  biocViewsVocab                    text    html    latex   example chm
  extractVignettes                  text    html    latex           chm
  genReposControlFiles              text    html    latex           chm
  getBiocSubViews                   text    html    latex   example chm
  getBiocViews                      text    html    latex   example chm
  getPacksAndViews                  text    html    latex           chm
  getSubTerms                       text    html    latex   example chm
  htmlDoc                           text    html    latex           chm
  htmlFilename                      text    html    latex           chm
  htmlValue                         text    html    latex           chm
  writeBiocViews                    text    html    latex           chm
  writeHtmlDoc                      text    html    latex           chm
  writePackageDetailHtml            text    html    latex           chm
  writeRepositoryHtml               text    html    latex           chm
  writeTopLevelView                 text    html    latex           chm
  write_REPOSITORY                  text    html    latex           chm
  write_SYMBOLS                     text    html    latex           chm
  write_VIEWS                       text    html    latex           chm
  zipping help files
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.4456\biocViews\chm\biocViews.chm



HHC4016: Warning: Cannot open "Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package biocViews for lazy loading
Loading required package: tools
Loading required package: graph
Loading required package: RBGL
Loading required package: XML

Attaching package: 'XML'


	The following object(s) are masked from package:graph :

	 addNode 

  adding MD5 sums

packaged installation of package 'biocViews' as biocViews_1.6.1.zip
* DONE (biocViews)