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Package 226/233HostnameOS / ArchBUILDCHECKBUILD BIN
VanillaICE 1.0.2
Robert Scharpf
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/VanillaICE
Last Changed Rev: 27988 / Revision: 30966
Last Changed Date: 2007-10-14 10:06:21 -0700 (Sun, 14 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
Package: VanillaICE
Version: 1.0.2
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build VanillaICE
StartedAt: 2008-04-09 14:46:01 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 14:46:54 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 52.6 seconds
RetCode: 0
Status: OK
PackageFile: VanillaICE_1.0.2.tar.gz
PackageFileSize: 781.3 KiB

Command output

* checking for file 'VanillaICE/DESCRIPTION' ... OK
* preparing 'VanillaICE':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'VanillaICE' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: SNPchip
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: oligoClasses
** help
 >>> Building/Updating help pages for package 'VanillaICE'
     Formats: text html latex example 
  HmmSnpCallSet-class               text    html    latex   example
  HmmSnpCopyNumberSet-class         text    html    latex   example
  HmmSnpSet-class                   text    html    latex   example
  ParHSet-class                     text    html    latex   example
  ParHmmSnpCallSet-class            text    html    latex   example
  ParHmmSnpCopyNumberSet-class      text    html    latex   example
  ParHmmSnpSet-class                text    html    latex   example
  bind                              text    html    latex   example
  breakpoints                       text    html    latex   example
  byArm                             text    html    latex   example
  calculateEmissionProbability      text    html    latex   example
  callEmission                      text    html    latex   example
  callsIce                          text    html    latex   example
  chromosome1                       text    html    latex   example
  chromosomeArm                     text    html    latex   example
  copyNumberIce                     text    html    latex   example
  distance                          text    html    latex   example
  emissionProbability               text    html    latex   example
  getCallEmission                   text    html    latex   example
  getCopyNumberLocation             text    html    latex   example
  getCopyNumberScale                text    html    latex   example
  getHapmapProbabilities            text    html    latex   example
  getInitialStateProbability        text    html    latex   example
  getLohProbability                 text    html    latex   example
  getTransitionProbability          text    html    latex   example
  hSet-class                        text    html    latex   example
  hapmapProbabilities               text    html    latex   example
  hmm                               text    html    latex   example
  hmmBySample                       text    html    latex   example
  initialStateProbability           text    html    latex   example
  isMissing                         text    html    latex   example
  likelihood                        text    html    latex   example
  locationCopyNumber                text    html    latex   example
  numberStates                      text    html    latex   example
  pCHOM                             text    html    latex   example
  plotPredictions                   text    html    latex   example
  predictions                       text    html    latex   example
  scaleCopyNumber                   text    html    latex   example
  stateNames                        text    html    latex   example
  transitionProbability             text    html    latex   example
  viterbi                           text    html    latex   example
** building package indices ...
* DONE (VanillaICE)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'VanillaICE_1.0.2.tar.gz'