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Package 147/233HostnameOS / ArchBUILDCHECKBUILD BIN
OLIN 1.14.0
Matthias Futschik
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/OLIN
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: OLIN
Version: 1.14.0
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check OLIN_1.14.0.tar.gz
StartedAt: 2008-04-09 18:10:45 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 18:12:29 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 103.8 seconds
RetCode: 0
Status: OK
CheckDir: OLIN.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/OLIN.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'OLIN/DESCRIPTION' ... OK
* this is package 'OLIN' version '1.14.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'OLIN' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating OLIN-Ex.R ... OK
* checking examples ... OK
* creating OLIN-manual.tex ... OK
* checking OLIN-manual.tex ... OK

OLIN.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/OLIN.Rcheck


---------- Making package OLIN ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
Note: unmatched right brace in 'anovaspatial' on or after line 3
Note: unmatched right brace in 'anovaspatial.Rd' on or after line 3
Note: unmatched right brace in 'fdr.spatial' on or after line 7
Note: unmatched right brace in 'fdr.spatial' on or after line 81
Note: unmatched right brace in 'fdr.spatial.Rd' on or after line 7
Note: unmatched right brace in 'fdr.spatial.Rd' on or after line 81
Note: unmatched right brace in 'fdr.spatial2' on or after line 7
Note: unmatched right brace in 'fdr.spatial2' on or after line 52
Note: unmatched right brace in 'fdr.spatial2.Rd' on or after line 7
Note: unmatched right brace in 'fdr.spatial2.Rd' on or after line 52
Note: unmatched right brace in 'ma.matrix' on or after line 22
Note: unmatched right brace in 'ma.matrix.Rd' on or after line 22
Note: unmatched right brace in 'ma.vector' on or after line 33
Note: unmatched right brace in 'ma.vector.Rd' on or after line 33
Note: unmatched right brace in 'p.int' on or after line 19
Note: unmatched right brace in 'p.int' on or after line 21
Note: unmatched right brace in 'p.int.Rd' on or after line 19
Note: unmatched right brace in 'p.int.Rd' on or after line 21
Note: unmatched right brace in 'p.int2' on or after line 18
Note: unmatched right brace in 'p.int2' on or after line 20
Note: unmatched right brace in 'p.int2.Rd' on or after line 18
Note: unmatched right brace in 'p.int2.Rd' on or after line 20
Note: unmatched right brace in 'p.spatial' on or after line 17
Note: unmatched right brace in 'p.spatial' on or after line 72
Note: unmatched right brace in 'p.spatial.Rd' on or after line 17
Note: unmatched right brace in 'p.spatial.Rd' on or after line 72
Note: unmatched right brace in 'p.spatial2' on or after line 17
Note: unmatched right brace in 'p.spatial2' on or after line 49
Note: unmatched right brace in 'p.spatial2.Rd' on or after line 17
Note: unmatched right brace in 'p.spatial2.Rd' on or after line 49
Note: unmatched right brace in 'sigxy.plot' on or after line 58
Note: unmatched right brace in 'sigxy.plot.Rd' on or after line 58
Note: unmatched right brace in 'sigxy.plot2' on or after line 40
Note: unmatched right brace in 'sigxy.plot2.Rd' on or after line 40
Note: unmatched right brace in 'v2m' on or after line 32
Note: unmatched right brace in 'v2m' on or after line 46
Note: unmatched right brace in 'v2m.Rd' on or after line 32
Note: unmatched right brace in 'v2m.Rd' on or after line 46
 >>> Building/Updating help pages for package 'OLIN'
     Formats: text html latex example chm 
  anovaint                          text    html    latex   example chm
  anovapin                          text    html    latex   example chm
  anovaplate                        text    html    latex   example chm
  anovaspatial                      text    html    latex   example chm
  backgroundCorrect2                text    html    latex   example chm
  bas                               text    html    latex   example chm
  colorbar.mxy                      text    html    latex   example chm
  colorbar.mxy.abs                  text    html    latex           chm
  colorbar.sig                      text    html    latex           chm
  fdr.int                           text    html    latex   example chm
  fdr.int2                          text    html    latex   example chm
  fdr.spatial                       text    html    latex   example chm
  fdr.spatial2                      text    html    latex   example chm
  fgbg.visu                         text    html    latex   example chm
  ino                               text    html    latex   example chm
  lin                               text    html    latex   example chm
  m2v                               text    html    latex   example chm
  ma.matrix                         text    html    latex   example chm
  ma.vector                         text    html    latex   example chm
  mxy.abs.plot                      text    html    latex   example chm
  mxy.plot                          text    html    latex   example chm
  mxy2.plot                         text    html    latex   example chm
  oin                               text    html    latex   example chm
  olin                              text    html    latex   example chm
  p.int                             text    html    latex   example chm
  p.int2                            text    html    latex   example chm
  p.spatial                         text    html    latex   example chm
  p.spatial2                        text    html    latex   example chm
  sig.mask                          text    html    latex   example chm
  sigint.plot                       text    html    latex   example chm
  sigint.plot2                      text    html    latex   example chm
  sigxy.plot                        text    html    latex   example chm
  sigxy.plot2                       text    html    latex   example chm
  sw                                text    html    latex           chm
  sw.olin                           text    html    latex           chm
  sw.xy                             text    html    latex           chm
  v2m                               text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\OLIN.Rcheck\00_pkg_src\OLIN\chm\OLIN.chm


Compile time: 0 minutes, 0 seconds
38	Topics
176	Local links
34	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\OLIN.Rcheck\00_pkg_src\OLIN\chm\OLIN.chm, 70,503 bytes
Compression decreased file by 96,263 bytes.
  preparing package OLIN for lazy loading
Loading required package: locfit
Loading required package: akima
Loading required package: lattice
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: marray
Loading required package: limma
  adding MD5 sums

* DONE (OLIN)