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Package 87/233HostnameOS / ArchBUILDCHECKBUILD BIN
GEOquery 2.2.1
Sean Davis
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/GEOquery
Last Changed Rev: 29374 / Revision: 30966
Last Changed Date: 2008-01-03 13:23:38 -0800 (Thu, 03 Jan 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: GEOquery
Version: 2.2.1
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=GEOquery.buildbin-libdir GEOquery_2.2.1.tar.gz
StartedAt: 2008-04-09 23:04:50 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 23:05:30 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 40.1 seconds
RetCode: 0
Status: OK
PackageFile: GEOquery_2.2.1.zip
PackageFileSize: 181.7 KiB

Command output

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/GEOquery.buildbin-libdir

Using auto-selected zip options ''

---------- Making package GEOquery ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'GEOquery'
     Formats: text html latex example chm 
  GDS-class                         text    html    latex           chm
  GDS2MA                            text    html    latex   example chm
  GEOData-class                     text    html    latex           chm
  GEODataTable-class                text    html    latex           chm
  GPL-class                         text    html    latex           chm
  GSE-class                         text    html    latex           chm
  GSM-class                         text    html    latex           chm
  dataTable                         text    html    latex           chm
  getGEO                            text    html    latex   example chm
  getGEOfile                        text    html    latex   example chm
  gunzip                            text    html    latex           chm
  parseGEO                          text    html    latex           chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.3516\GEOquery\chm\GEOquery.chm



HHC4016: Warning: Cannot open "c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  adding MD5 sums

packaged installation of package 'GEOquery' as GEOquery_2.2.1.zip
* DONE (GEOquery)