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Package 17/233HostnameOS / ArchBUILDCHECKBUILD BIN
AnnBuilder 1.16.0
J. Zhang
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/AnnBuilder
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64 [ OK ] OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: AnnBuilder
Version: 1.16.0
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build AnnBuilder
StartedAt: 2008-04-09 13:58:43 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 13:58:52 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 9.5 seconds
RetCode: 0
Status: OK
PackageFile: AnnBuilder_1.16.0.tar.gz
PackageFileSize: 475.6 KiB

Command output

* checking for file 'AnnBuilder/DESCRIPTION' ... OK
* preparing 'AnnBuilder':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'AnnBuilder' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: XML
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
** help
 >>> Building/Updating help pages for package 'AnnBuilder'
     Formats: text html latex example 
  ABPkgBuilder                      text    html    latex   example
  EG-class                          text    html    latex
  GEO-class                         text    html    latex   example
  GO-class                          text    html    latex
  GOPkgBuilder                      text    html    latex   example
  GOXMLParser                       text    html    latex
  GP-class                          text    html    latex   example
  HG-class                          text    html    latex
  IPI-class                         text    html    latex   example
  KEGG-class                        text    html    latex   example
  KEGGPkgBuilder                    text    html    latex
  LL-class                          text    html    latex   example
  MeSHParser                        text    html    latex
  PFAM-class                        text    html    latex   example
  SPPkgBuilder                      text    html    latex
  UG-class                          text    html    latex   example
  YEAST-class                       text    html    latex   example
  YG-class                          text    html    latex   example
  addNamespace                      text    html    latex   example
  athPkgBuilder                     text    html    latex   example
  cMapPathBuilder                   text    html    latex   example
  chrLocPkgBuilder                  text    html    latex   example
  cleanSrcObjs                      text    html    latex
  cols2Env                          text    html    latex   example
  descriptionInfo                   text    html    latex   example
  downloadSourceData                text    html    latex
  fileMuncher                       text    html    latex   example
  fileToXML                         text    html    latex   example
  getChroLocation                   text    html    latex   example
  getDPStats                        text    html    latex   example
  getKEGGIDNName                    text    html    latex   example
  getPubDataGo                      text    html    latex
  getSrcBuilt                       text    html    latex   example
  getSrcUrl                         text    html    latex
  getUGShortName                    text    html    latex   example
  getYeastData                      text    html    latex   example
  homoPkgBuilder                    text    html    latex
  loadFromUrl                       text    html    latex   example
  makeLLDB                          text    html    latex
  makeSrcInfo                       text    html    latex   example
  map2LL                            text    html    latex   example
  pfamBuilder                       text    html    latex   example
  print.ABQCList                    text    html    latex   example
  pubDataURLs                       text    html    latex   example
  pubRepo-class                     text    html    latex   example
  queryGEO                          text    html    latex   example
  readSourceUrlConfig               text    html    latex
  resolveMaps                       text    html    latex   example
  sourceURLs                        text    html    latex   example
  unifyMappings                     text    html    latex   example
  wget                              text    html    latex
  writeChrLength                    text    html    latex   example
  writeHomoXMLData                  text    html    latex
  writeManPage                      text    html    latex   example
  writeSourceUrlConfig              text    html    latex
  writeXMLHeader                    text    html    latex   example
  yeastAnn                          text    html    latex   example
  yeastPkgBuilder                   text    html    latex   example
** building package indices ...
* DONE (AnnBuilder)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'AnnBuilder_1.16.0.tar.gz'