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Package 126/233HostnameOS / ArchBUILDCHECKBUILD BIN
makePlatformDesign 1.2.0
Benilton Carvalho
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/makePlatformDesign
Last Changed Rev: 27709 / Revision: 30807
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: makePlatformDesign
Version: 1.2.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=makePlatformDesign.buildbin-libdir makePlatformDesign_1.2.0.tar.gz
StartedAt: 2008-04-02 23:20:06 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 23:21:11 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 64.9 seconds
RetCode: 0
Status: OK
PackageFile: makePlatformDesign_1.2.0.zip
PackageFileSize: 49.73 KiB

Command output

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/makePlatformDesign.buildbin-libdir

Using auto-selected zip options ''

---------- Making package makePlatformDesign ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making matchprobes.d from matchprobes.c
making strutils.d from strutils.c
gcc-sjlj  -std=gnu99  -ID:/biocbld/bbs-2.1-bioc/R/include     -O3 -Wall  -c matchprobes.c -o matchprobes.o
gcc-sjlj  -std=gnu99  -ID:/biocbld/bbs-2.1-bioc/R/include     -O3 -Wall  -c strutils.c -o strutils.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I D:/biocbld/bbs-2.1-bioc/R/include  -i makePlatformDesign_res.rc -o makePlatformDesign_res.o
gcc-sjlj  -std=gnu99  -shared -s  -o makePlatformDesign.dll makePlatformDesign.def matchprobes.o strutils.o makePlatformDesign_res.o  -LD:/biocbld/bbs-2.1-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'makePlatformDesign'
     Formats: text html latex example chm 
  makePDpackage                     text    html    latex   example chm
  makePlatformDesign-internal       text    html    latex           chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "rogram Files\Intel\DMIX;c:\Program Files\Windows Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program ".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.4448\makePlatformDesign\chm\makePlatformDesign.chm



HHC4016: Warning: Cannot open "rogram Files\Intel\DMIX;c:\Program Files\Windows Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program ".





The following files were not compiled:

  preparing package makePlatformDesign for lazy loading
Loading required package: affyio
Loading required package: oligo
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: splines
Loading required package: RSQLite
Loading required package: DBI
Loading required package: preprocessCore
Loading required package: AnnotationDbi
Loading required package: affxparser
Loading required package: oligoClasses
This is the oligo package

Attaching package: 'oligo'


	The following object(s) are masked from package:oligoClasses :

	 calls,
	 calls<-,
	 callsConfidence,
	 callsConfidence<-,
	 cnConfidence,
	 cnConfidence<-,
	 copyNumber,
	 copyNumber<- 

  adding MD5 sums

packaged installation of package 'makePlatformDesign' as makePlatformDesign_1.2.0.zip
* DONE (makePlatformDesign)