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Package 68/233HostnameOS / ArchBUILDCHECKBUILD BIN
explorase 1.2.0
Michael Lawrence
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/explorase
Last Changed Rev: 28201 / Revision: 30807
Last Changed Date: 2007-10-24 12:09:11 -0700 (Wed, 24 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS  OK 
Package: explorase
Version: 1.2.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check explorase_1.2.0.tar.gz
StartedAt: 2008-04-02 19:12:31 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 19:15:21 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 170.1 seconds
RetCode: 0
Status: OK
CheckDir: explorase.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-bioc/meat/explorase.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'explorase/DESCRIPTION' ... OK
* this is package 'explorase' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'explorase' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating explorase-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating explorase-manual.tex ... OK
* checking explorase-manual.tex ... OK

explorase.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/explorase.Rcheck


---------- Making package explorase ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'explorase'
     Formats: text html latex example chm 
  exp-addEntityType-vx              text    html    latex   example chm
  exp-addFilterRule-rn              text    html    latex   example chm
  exp-calcAngleDist-31              text    html    latex   example chm
  exp-calcCanberraDist              text    html    latex   example chm
  exp-calcCorrelationDist-45        text    html    latex   example chm
  exp-calcDiff-y4                   text    html    latex   example chm
  exp-calcEuclideanDist-dn          text    html    latex   example chm
  exp-calcMahalanobisDist-r1        text    html    latex   example chm
  exp-calcResiduals-ps              text    html    latex   example chm
  exp-calcZeroCorDist-by            text    html    latex   example chm
  exp-close                         text    html    latex           chm
  exp-colorEntities-1h              text    html    latex   example chm
  exp-dataset-6l                    text    html    latex   example chm
  exp-designFactors-72              text    html    latex   example chm
  exp-designFrame-d0                text    html    latex   example chm
  exp-designSelection-5s            text    html    latex   example chm
  exp-entitiesInList-df             text    html    latex   example chm
  exp-entityFrame-4j                text    html    latex   example chm
  exp-entitySelection-11            text    html    latex   example chm
  exp-entityType-69                 text    html    latex   example chm
  exp-entityTypes-9e                text    html    latex   example chm
  exp-filterRules-vt                text    html    latex   example chm
  exp-findPatterns-yw               text    html    latex   example chm
  exp-ggobi-69                      text    html    latex   example chm
  exp-isRunning-fo                  text    html    latex   example chm
  exp-listFrame-gp                  text    html    latex   example chm
  exp-listSelection                 text    html    latex   example chm
  exp-loadData-bo                   text    html    latex   example chm
  exp-loadDesign-35                 text    html    latex   example chm
  exp-loadFiles-1w                  text    html    latex   example chm
  exp-loadInfo-gk                   text    html    latex   example chm
  exp-loadLists-pr                  text    html    latex   example chm
  exp-loadProject-1g                text    html    latex   example chm
  exp-newList-bs                    text    html    latex   example chm
  exp-removeFilterRules-1i          text    html    latex   example chm
  exp-showClustering-b7             text    html    latex   example chm
  exp-showPatterns-bh               text    html    latex   example chm
  exp-showResults-sk                text    html    latex   example chm
  exp-toggleFilterRules-ts          text    html    latex   example chm
  explorase                         text    html    latex           chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.1-bioc\meat\explorase.Rcheck\00_pkg_src\explorase\chm\explorase.chm

HHC4016: Warning: Cannot open "c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".


The following files were not compiled:
  preparing package explorase for lazy loading
Loading required package: rggobi
Loading required package: RGtk2
Loading required package: limma
  adding MD5 sums

* DONE (explorase)