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Package 194/233HostnameOS / ArchBUILDCHECKBUILD BIN
Ruuid 1.16.1
Biocore Team c/o BioC user list
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/Ruuid
Last Changed Rev: 27821 / Revision: 30807
Last Changed Date: 2007-10-06 15:08:14 -0700 (Sat, 06 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: Ruuid
Version: 1.16.1
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check Ruuid_1.16.1.tar.gz
StartedAt: 2008-04-02 21:51:31 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 21:52:54 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 83.9 seconds
RetCode: 0
Status: OK
CheckDir: Ruuid.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-bioc/meat/Ruuid.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'Ruuid/DESCRIPTION' ... OK
* this is package 'Ruuid' version '1.16.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Ruuid' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating Ruuid-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating Ruuid-manual.tex ... OK
* checking Ruuid-manual.tex ... OK

Ruuid.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/Ruuid.Rcheck


---------- Making package Ruuid ------------

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************

  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  running src/Makefile.win ...
gcc-sjlj  -std=gnu99   -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32  -c Ruuid.c -o Ruuid.o
gcc-sjlj  -std=gnu99   -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32  -c pack.c -o pack.o
gcc-sjlj  -std=gnu99   -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32  -c parse.c -o parse.o
gcc-sjlj  -std=gnu99   -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32  -c Rinit.c -o Rinit.o
gcc-sjlj  -std=gnu99   -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32  -c unpack.c -o unpack.o
gcc-sjlj  -std=gnu99   -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32  -c unparse.c -o unparse.o
rm -f -f Ruuid.a
ar cr Ruuid.a *.o
ranlib Ruuid.a
gcc-sjlj  -std=gnu99  -shared   -o Ruuid.dll Ruuid.def Ruuid.a  -Ld:/biocbld/bbs-2.1-bioc/R/bin -lrpcrt4 -lR
  ... done
  installing DLL
  installing R files
  installing inst files
  preparing package Ruuid for lazy loading
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'Ruuid'
     Formats: text html latex example chm 
  Ruuid-class                       text    html    latex   example chm
  getuuid                           text    html    latex   example chm
  uuidt-class                       text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.1-bioc\meat\Ruuid.Rcheck\00_pkg_src\Ruuid\chm\Ruuid.chm

HHC4016: Warning: Cannot open "GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".


The following files were not compiled:
  adding MD5 sums

* DONE (Ruuid)