Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q [R] S  T  U  V  W  X  Y  Z 

Package 187/233HostnameOS / ArchBUILDCHECKBUILD BIN
Rintact 1.0.0
Tony Chiang
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/Rintact
Last Changed Rev: 27809 / Revision: 30807
Last Changed Date: 2007-10-05 18:27:16 -0700 (Fri, 05 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: Rintact
Version: 1.0.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build Rintact
StartedAt: 2008-04-02 17:34:53 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 17:36:45 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 111.5 seconds
RetCode: 0
Status: OK
PackageFile: Rintact_1.0.0.tar.gz
PackageFileSize: 3.437 MiB

Command output

* checking for file 'Rintact/DESCRIPTION' ... OK
* preparing 'Rintact':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst458876470


---------- Making package Rintact ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'Rintact'
     Formats: text html latex example chm 
  bait                              text    html    latex   example chm
  complexEntry                      text    html    latex           chm
  complexes                         text    html    latex   example chm
  eListHandler                      text    html    latex   example chm
  intactComplex                     text    html    latex           chm
  intactGraph                       text    html    latex           chm
  intactHyperGraph                  text    html    latex           chm
  intactInteraction                 text    html    latex           chm
  intactXML2Graph                   text    html    latex   example chm
  interactionEntry                  text    html    latex           chm
  interactions                      text    html    latex   example chm
  interactors                       text    html    latex   example chm
  list2Matrix                       text    html    latex   example chm
  organismName                      text    html    latex   example chm
  prey                              text    html    latex   example chm
  psi25interaction                  text    html    latex   example chm
  releaseDate                       text    html    latex   example chm
  taxId                             text    html    latex   example chm
  translateIntactID                 text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "n;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\Rintact\chm\Rintact.chm



HHC4016: Warning: Cannot open "n;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package Rintact for lazy loading
Loading required package: XML
Loading required package: graph

Attaching package: 'graph'


	The following object(s) are masked from package:XML :

	 addNode 

Loading required package: ppiStats
Loading required package: GO
Loading required package: GOstats
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
Loading required package: RSQLite

Attaching package: 'GO.db'


	The following object(s) are masked from package:GO :

	 GOBPANCESTOR,
	 GOBPCHILDREN,
	 GOBPOFFSPRING,
	 GOBPPARENTS,
	 GOCCANCESTOR,
	 GOCCCHILDREN,
	 GOCCOFFSPRING,
	 GOCCPARENTS,
	 GOMAPCOUNTS,
	 GOMFANCESTOR,
	 GOMFCHILDREN,
	 GOMFOFFSPRING,
	 GOMFPARENTS,
	 GOOBSOLETE,
	 GOSYNONYM,
	 GOTERM 

Loading required package: annotate
Loading required package: xtable
Loading required package: RBGL
Loading required package: Category
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: YEAST
Loading required package: ppiData
Loading required package: Rgraphviz

Attaching package: 'Rgraphviz'


	The following object(s) are masked from package:annotate :

	 toFile 

Loading required package: hypergraph

Attaching package: 'hypergraph'


	The following object(s) are masked from package:Rgraphviz :

	 head,
	 tail 


	The following object(s) are masked from package:xtable :

	 label,
	 label<- 


	The following object(s) are masked from package:AnnotationDbi :

	 head,
	 tail 


	The following object(s) are masked from package:utils :

	 head,
	 tail 

  adding MD5 sums

* DONE (Rintact)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'Rintact_1.0.0.tar.gz'