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Package 113/234HostnameOSArchBUILDCHECKBUILD BIN
limma 2.12.0
Gordon Smyth
Last Changed Date: 2007-10-02 17:41:09 -0700
Last Changed Rev: 27709
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK [ OK ] OK 
pitt Mac OS X (10.4.10) i386  OK  OK  OK 
Package: limma
Version: 2.12.0
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check limma_2.12.0.tar.gz
RetCode: 0
Time: 149.9 seconds
Status: OK
CheckDir: limma.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/limma.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'limma/DESCRIPTION' ... OK
* this is package 'limma' version '2.12.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'limma' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating limma-Ex.R ... OK
* checking examples ... OK
* checking tests ...
make[1]: Entering directory `/cygdrive/e/biocbld/bbs-2.1-bioc/meat/limma.Rcheck/tests'
  Running 'limma-Tests.R'
  Comparing 'limma-Tests.Rout' to 'limma-Tests.Rout.save' ...OK
make[1]: Leaving directory `/cygdrive/e/biocbld/bbs-2.1-bioc/meat/limma.Rcheck/tests'
 OK
* checking package vignettes in 'inst/doc' ... OK
* creating limma-manual.tex ... OK
* checking limma-manual.tex ... OK

limma.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/limma.Rcheck


---------- Making package limma ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  preparing package limma for lazy loading
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'limma'
     Formats: text html latex example chm 
  01Introduction                    text    html    latex           chm
  02classes                         text    html    latex           chm
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Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\limma.Rcheck\00_pkg_src\limma\chm\limma.chm


Compile time: 0 minutes, 1 second
129	Topics
671	Local links
20	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\limma.Rcheck\00_pkg_src\limma\chm\limma.chm, 211,066 bytes
Compression decreased file by 327,107 bytes.
  adding MD5 sums

* DONE (limma)