Package: ACME

Version: 1.4.0

Command: /Users/biocbuild/BBS/utils/build-universal.sh ACME_1.4.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R ACME.buildbin-libdir

RetCode: 0

Time: 13.7 seconds

Status: OK

PackageFile: ACME_1.4.0.tgz

                    INSTALLATION WITH 'R CMD INSTALL ACME_1.4.0.tar.gz'

* Installing to library 'ACME.buildbin-libdir'
* Installing *source* package 'ACME' ...
** libs
** arch - i386
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386  -msse3    -fPIC  -g -O2 -Wall -march=nocona -c windowChisq.c -o windowChisq.o
windowChisq.c: In function 'windowChisq':
windowChisq.c:58: warning: suggest parentheses around comparison in operand of &
windowChisq.c:63: warning: suggest parentheses around comparison in operand of &
windowChisq.c:21: warning: unused variable 'xa'
windowChisq.c: At top level:
windowChisq.c:86: warning: initialization from incompatible pointer type
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o ACME.so windowChisq.o   -F/Library/Frameworks/R.framework/.. -framework R 
** arch - ppc
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c windowChisq.c -o windowChisq.o
windowChisq.c: In function 'windowChisq':
windowChisq.c:58: warning: suggest parentheses around comparison in operand of &
windowChisq.c:63: warning: suggest parentheses around comparison in operand of &
windowChisq.c:21: warning: unused variable 'xa'
windowChisq.c: At top level:
windowChisq.c:86: warning: initialization from incompatible pointer type
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o ACME.so windowChisq.o   -F/Library/Frameworks/R.framework/.. -framework R 
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'ACME'
     Formats: text html latex example 
  aGFF-class                        text    html    latex   example
  aGFFCalc-class                    text    html    latex   example
  do.aGFF.calc                      text    html    latex   example
  example.agff                      text    html    latex   example
  findClosestGene                   text    html    latex   example
  findRegions                       text    html    latex   example
  getRefflat                        text    html    latex   example
  read.resultsGFF                   text    html    latex   example
  write.sgr                         text    html    latex   example
** building package indices ...
* DONE (ACME)

tar: ACME/extdata/testsamp1.gff: file changed as we read it
tar: ACME/extdata/testsamp2.gff: file changed as we read it