Package: davidTiling

Version: 1.2.4

Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check davidTiling_1.2.4.tar.gz

RetCode: 0

Time: 772.4 seconds

Status: OK

CheckDir: davidTiling.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.0-data-experiment/meat/davidTiling.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'davidTiling/DESCRIPTION' ... OK
* this is package 'davidTiling' version '1.2.4'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'davidTiling' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating davidTiling-Ex.R ... OK
* checking examples ... OK
* creating davidTiling-manual.tex ... OK
* checking davidTiling-manual.tex ... OK

installing R.css in D:/biocbld/bbs-2.0-data-experiment/meat/davidTiling.Rcheck


---------- Making package davidTiling ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: tilingArray
Loading required package: affy
Loading required package: affyio
Loading required package: RColorBrewer
Loading required package: grid
Loading required package: strucchange
Loading required package: zoo

Attaching package: 'zoo'


	The following object(s) are masked from package:base :

	 rapply 

Loading required package: sandwich
Loading required package: vsn
Loading required package: limma
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: geneplotter
Loading required package: annotate
Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: pixmap
Loading required package: GO
  installing inst files
  installing data files
  installing man source files
  installing indices
Loading required package: methods
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'davidTiling'
     Formats: text html latex example chm 
  GOHyperG                          text    html    latex   example chm
  davidTiling                       text    html    latex   example chm
  getAttributeField                 text    html    latex   example chm
  getGO                             text    html    latex   example chm
  gff                               text    html    latex   example chm
  probeAnno                         text    html    latex   example chm
  scatterWithHist                   text    html    latex   example chm
  scoreSegments                     text    html    latex   example chm
  showDens                          text    html    latex   example chm
  yeastFeatures                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.0-data-experiment\meat\davidTiling.Rcheck\00_pkg_src\davidTiling\chm\davidTiling.chm


Compile time: 0 minutes, 0 seconds
11	Topics
28	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-2.0-data-experiment\meat\davidTiling.Rcheck\00_pkg_src\davidTiling\chm\davidTiling.chm, 28,042 bytes
Compression decreased file by 6,070 bytes.
  adding MD5 sums

* DONE (davidTiling)