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genArise

1.12.0

IFC Development Team
Last Changed Date: 2007-04-24 11:21:48 -0700
Last Changed Rev: 24214
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc [ OK ] OK 
lemming Windows Server 2003 (32-bit) x64  OK  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
derby Mac OS X (10.4.9) i686  OK  OK 
Package: genArise
Version: 1.12.0
Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD build genArise
RetCode: 0
Time: 45.6 seconds
Status: OK
PackageFile: genArise_1.12.0.tar.gz

Command output

* checking for file 'genArise/DESCRIPTION' ... OK
* preparing 'genArise':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
* Installing *source* package 'genArise' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: locfit
Loading required package: akima
Loading required package: lattice
locfit 1.5-3 	 2006-04-06 
Loading required package: tkrplot
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: xtable
** help
 >>> Building/Updating help pages for package 'genArise'
     Formats: text html latex example 
  DataSet-class                     text    html    latex
  Simon                             text    html    latex   example
  Spot-class                        text    html    latex
  WT.dataset                        text    html    latex   example
  Zscore                            text    html    latex   example
  Zscore.plot                       text    html    latex   example
  Zscore.points                     text    html    latex
  a.arise                           text    html    latex   example
  alter.unique                      text    html    latex   example
  analysis.window                   text    html    latex
  annotations                       text    html    latex
  back.gui                          text    html    latex
  bg.correct                        text    html    latex   example
  classes                           text    html    latex
  create.project                    text    html    latex
  cys.plot                          text    html    latex   example
  filter.spot                       text    html    latex   example
  genArise                          text    html    latex
  genArise.init                     text    html    latex
  genMerge                          text    html    latex
  get.Zscore                        text    html    latex
  get.values                        text    html    latex
  global.norm                       text    html    latex   example
  graphic.choose                    text    html    latex
  grid.norm                         text    html    latex   example
  help                              text    html    latex
  i.arise                           text    html    latex   example
  imageLimma                        text    html    latex   example
  m.arise                           text    html    latex   example
  ma.plot                           text    html    latex   example
  make.swap                         text    html    latex
  meanUnique                        text    html    latex   example
  note                              text    html    latex
  old.project                       text    html    latex
  post.analysis                     text    html    latex
  principal                         text    html    latex
  projects.select                   text    html    latex
  r.arise                           text    html    latex   example
  read.dataset                      text    html    latex
  read.spot                         text    html    latex
  reset.history                     text    html    latex
  ri.plot                           text    html    latex   example
  set.grid.properties               text    html    latex
  set.history.project               text    html    latex
  set.path.project                  text    html    latex
  set.project.properties            text    html    latex
  single.norm                       text    html    latex
  spotUnique                        text    html    latex   example
  swap.select                       text    html    latex
  trim                              text    html    latex   example
  write.dataSet                     text    html    latex   example
  write.spot                        text    html    latex   example
  write.zscore                      text    html    latex   example
** building package indices ...
* DONE (genArise)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'genArise_1.12.0.tar.gz'