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cellHTS

1.6.0

Ligia Bras
Last Changed Date: 2007-04-24 11:21:48 -0700
Last Changed Rev: 24214
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686 [ ERROR ]skipped
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 (32-bit) x64  OK  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
derby Mac OS X (10.4.9) i686  OK  OK 
Package: cellHTS
Version: 1.6.0
Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD build cellHTS
RetCode: 1
Time: 77.2 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'cellHTS/DESCRIPTION' ... OK
* preparing 'cellHTS':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'cellHTS' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: prada
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RColorBrewer
Loading required package: grid
Scalable Robust Estimators with High Breakdown Point (version 0.3-05)
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
** help
 >>> Building/Updating help pages for package 'cellHTS'
     Formats: text html latex example 
  Bscore                            text    html    latex   example
  ROC                               text    html    latex   example
  annotate                          text    html    latex   example
  bdgpbiomart                       text    html    latex   example
  configure                         text    html    latex   example
  data-KcViab                       text    html    latex   example
  data-KcViabSmall                  text    html    latex   example
  getLibraryPlate                   text    html    latex   example
  getMatrix                         text    html    latex   example
  imageScreen                       text    html    latex   example
  normalizeChannels                 text    html    latex   example
  normalizePlates                   text    html    latex   example
  oneRowPerId                       text    html    latex   example
  plotPlateLibrary                  text    html    latex   example
  plotSpatialEffects                text    html    latex   example
  print.cellHTS                     text    html    latex   example
  readPlateData                     text    html    latex   example
  screenMatch                       text    html    latex   example
  summarizeReplicates               text    html    latex   example
  write.tabdel                      text    html    latex   example
  writeReport                       text    html    latex   example
  writeTab                          text    html    latex   example
** building package indices ...
* DONE (cellHTS)
* creating vignettes ... ERROR
Loading required package: prada
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RColorBrewer
Loading required package: grid
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: affy
Loading required package: affyio
Loading required package: limma

Error: processing vignette 'twoChannels.Rnw' failed with diagnostics:
 chunk 12 (label=writeReport1Do) 
Error in X11(paste("png::", filename, sep = ""), width, height, pointsize,  : 
	unable to start device PNG
In addition: Warning message:
unable to open connection to X11 display '' 
recover called non-interactively; frames dumped, use debugger() to view