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Package 18/208OSArchBUILDCHECKBUILD BIN

apComplex

2.0.0

Denise Scholtens		Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686[ ERROR ]skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64 OK  OK  OK 
Windows Server 2003 NA OK  ERROR  OK 
Mac OS X (10.4.6) i686 OK  WARNINGS 
Package: apComplex
Version: 2.0.0
Command: /loc/biocbuild/2.0d/R/bin/R CMD build apComplex
RetCode: 1
Time: 42.9 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'apComplex/DESCRIPTION' ... OK
* preparing 'apComplex':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
* Installing *source* package 'apComplex' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'apComplex'
     Formats: text html latex example 
  HMSPCI                            text    html    latex   example
  Krogan                            text    html    latex   example
  LCjoin                            text    html    latex   example
  MBMEcHMSPCI                       text    html    latex   example
  MBMEcKrogan                       text    html    latex   example
  MBMEcTAP                          text    html    latex   example
  TAP                               text    html    latex   example
  apEX                              text    html    latex   example
  bhmaxSubgraph                     text    html    latex   example
  findComplexes                     text    html    latex   example
  gavinBP2006                       text    html    latex   example
  kroganBPMat2006                   text    html    latex   example
  mergeComplexes                    text    html    latex   example
  sortComplexes                     text    html    latex   example
  yNameTAP                          text    html    latex   example
  yTAP                              text    html    latex   example
** building package indices ...
* DONE (apComplex)
* creating vignettes ... ERROR
Loading required package: graph
Loading required package: RBGL
Loading required package: geneplotter
Loading required package: annotate
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: lattice
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: undefined symbol: gvRenderFilename
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'