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Package 81/208OSArchBUILDCHECKBUILD BIN

GOstats

2.1.7

S. Falcon
Linux (SUSE 9.2) x86_64 OK  WARNINGS 
Linux (SUSE 10.1) x86_64 OK  WARNINGS 
Linux (SUSE 9.2) i686[ ERROR ]skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64 ERROR skippedskipped
Windows Server 2003 NA ERROR skippedskipped
Mac OS X (10.4.6) i686 OK  WARNINGS 
Package: GOstats
Version: 2.1.7
Command: /loc/biocbuild/2.0d/R/bin/R CMD build GOstats
RetCode: 1
Time: 22.3 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'GOstats/DESCRIPTION' ... OK
* preparing 'GOstats':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'GOstats' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: graph
Loading required package: GO
Loading required package: annotate
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: RBGL
Loading required package: Category
Loading required package: KEGG
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
** help
 >>> Building/Updating help pages for package 'GOstats'
     Formats: text html latex example 
  GOHyperG                          text    html    latex   example
  GOHyperGResult-class              text    html    latex
  GOLeaves                          text    html    latex   example
  GOstats-defunct                   text    html    latex
  GOstats-package                   text    html    latex
  Ndists                            text    html    latex   example
  compCorrGraph                     text    html    latex   example
  compGdist                         text    html    latex   example
  hyperG2Affy                       text    html    latex   example
  hyperGTest                        text    html    latex
  hyperGtable                       text    html    latex   example
  idx2dimnames                      text    html    latex   example
  makeGOGraph                       text    html    latex   example
  notConn                           text    html    latex   example
  oneGOGraph                        text    html    latex   example
  probeSetSummary                   text    html    latex
  shortestPath                      text    html    latex   example
  simLL                             text    html    latex   example
  triadCensus                       text    html    latex   example
** building package indices ...
* DONE (GOstats)
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: survival
Loading required package: splines
Loading required package: graph
Loading required package: GO
Loading required package: RBGL
Loading required package: Category
Loading required package: KEGG
Loading required package: geneplotter
Loading required package: lattice

Error:  chunk 2 (label=Setup) 
Error: package/namespace load failed for 'Rgraphviz'
Error in buildVignettes(dir = ".") : Error:  chunk 2 (label=Setup) 
Error: package/namespace load failed for 'Rgraphviz'
Execution halted