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Package 85/208OSArchBUILDCHECKBUILD BIN

GraphAT

1.7.0

Thomas LaFramboise
Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686 OK  OK 
Solaris 2.9 sparc OK  OK 
Windows Server 2003 x86_64 OK  OK  OK 
Windows Server 2003 NA OK [ ERROR ] OK 
Mac OS X (10.4.6) i686 OK  OK 
Package: GraphAT
Version: 1.7.0
Command: E:\biocbld\2.0d\R\bin\R.exe CMD check GraphAT_1.7.0.tar.gz
RetCode: 1
Time: 200.5 seconds
Status: ERROR
CheckDir: GraphAT.Rcheck
Warnings: NA

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/2.0d/Rpacks/GraphAT.Rcheck'
* using R version 2.5.0 Under development (unstable) (2006-12-05 r40126)
* checking for file 'GraphAT/DESCRIPTION' ... OK
* this is package 'GraphAT' version '1.7.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GraphAT' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating GraphAT-Ex.R ... OK
* checking examples ... OK
* creating GraphAT-manual.tex ... OK
* checking GraphAT-manual.tex ... ERROR
LaTeX errors when creating DVI version.
This typically indicates Rd problems.

GraphAT.Rcheck/00install.out:

installing R.css in E:/biocbld/2.0d/Rpacks/GraphAT.Rcheck


---------- Making package GraphAT ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'GraphAT'
     Formats: text html latex example chm 
  Phenoclusters                     text    html    latex   example chm
  causton                           text    html    latex   example chm
  cellcycle                         text    html    latex   example chm
  clust2Mat                         text    html    latex   example chm
  depthmat                          text    html    latex   example chm
  getpvalue                         text    html    latex   example chm
  giaever                           text    html    latex   example chm
  mRNAclusters                      text    html    latex   example chm
  makeClustM                        text    html    latex   example chm
  mat2UndirG                        text    html    latex   example chm
  permPower                         text    html    latex   example chm
  perms                             text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\2.0d\Rpacks\GraphAT.Rcheck\00_pkg_src\GraphAT\chm\GraphAT.chm


Compile time: 0 minutes, 0 seconds
13	Topics
37	Local links
5	Internet links
1	Graphic


Created e:\biocbld\2.0d\Rpacks\GraphAT.Rcheck\00_pkg_src\GraphAT\chm\GraphAT.chm, 29,026 bytes
Compression decreased file by 7,759 bytes.
  adding MD5 sums

* DONE (GraphAT)