Package: biocViews

Version: 1.3.8

Command: D:\biocbld\2.0d\R\bin\R.exe CMD check biocViews_1.3.8.tar.gz

RetCode: 0

Time: 81.7 seconds

Status: OK

CheckDir: biocViews.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/2.0d/Rpacks/biocViews.Rcheck'
* using R version 2.5.0 Under development (unstable) (2006-12-05 r40126)
* checking for file 'biocViews/DESCRIPTION' ... OK
* this is package 'biocViews' version '1.3.8'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'biocViews' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating biocViews-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating biocViews-manual.tex ... OK
* checking biocViews-manual.tex ... OK

installing R.css in D:/biocbld/2.0d/Rpacks/biocViews.Rcheck


---------- Making package biocViews ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'biocViews'
     Formats: text html latex example chm 
  BiocView-class                    text    html    latex           chm
  Htmlized-class                    text    html    latex           chm
  PackageDetail-class               text    html    latex   example chm
  RepositoryDetail-class            text    html    latex           chm
  biocViewsVocab                    text    html    latex   example chm
  extractVignettes                  text    html    latex           chm
  genReposControlFiles              text    html    latex           chm
  getBiocSubViews                   text    html    latex   example chm
  getBiocViews                      text    html    latex   example chm
  getPacksAndViews                  text    html    latex           chm
  getSubTerms                       text    html    latex   example chm
  htmlDoc                           text    html    latex           chm
  htmlFilename                      text    html    latex           chm
  htmlValue                         text    html    latex           chm
  writeBiocViews                    text    html    latex           chm
  writeHtmlDoc                      text    html    latex           chm
  writePackageDetailHtml            text    html    latex           chm
  writeRepositoryHtml               text    html    latex           chm
  writeTopLevelView                 text    html    latex           chm
  write_REPOSITORY                  text    html    latex           chm
  write_SYMBOLS                     text    html    latex           chm
  write_VIEWS                       text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\2.0d\Rpacks\biocViews.Rcheck\00_pkg_src\biocViews\chm\biocViews.chm


Compile time: 0 minutes, 0 seconds
23	Topics
104	Local links
0	Internet links
1	Graphic


Created d:\biocbld\2.0d\Rpacks\biocViews.Rcheck\00_pkg_src\biocViews\chm\biocViews.chm, 34,920 bytes
Compression decreased file by 40,590 bytes.
  preparing package biocViews for lazy loading
Loading required package: tools
Loading required package: graph
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: RBGL
Loading required package: XML

Attaching package: 'XML'


	The following object(s) are masked from package:graph :

	 addNode 

  adding MD5 sums

* DONE (biocViews)