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Package 102/208OSArchBUILDCHECKBUILD BIN

LMGene

1.5.0

John Tillinghast
Linux (SUSE 9.2) x86_64 ERROR skipped
Linux (SUSE 10.1) x86_64 ERROR skipped
Linux (SUSE 9.2) i686 ERROR skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64[ ERROR ]skippedskipped
Windows Server 2003 NA ERROR skippedskipped
Mac OS X (10.4.6) i686 ERROR skipped
Package: LMGene
Version: 1.5.0
Command: D:\biocbld\2.0d\R\bin\R.exe CMD build LMGene
RetCode: 1
Time: 12.8 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'LMGene/DESCRIPTION' ... OK
* preparing 'LMGene':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/2.0d/tmpdir/Rinst330023254


---------- Making package LMGene ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'LMGene'
     Formats: text html latex example chm 
  LMGene                            text    html    latex   example chm
  genediff                          text    html    latex   example chm
  glog                              text    html    latex   example chm
  jggrad2                           text    html    latex   example chm
  jglog                             text    html    latex   example chm
  lnorm                             text    html    latex   example chm
  mlm2lm                            text    html    latex   example chm
  msa                               text    html    latex   example chm
  msecalc                           text    html    latex   example chm
  neweS                             text    html    latex   example chm
  norm                              text    html    latex   example chm
  pvadjust                          text    html    latex   example chm
  rowaov                            text    html    latex   example chm
  rowlist                           text    html    latex   example chm
  tranest                           text    html    latex   example chm
  tranest2                          text    html    latex   example chm
  vlist                             text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\2.0d\Rpacks\LMGene\chm\LMGene.chm





Compile time: 0 minutes, 0 seconds

18	Topics

74	Local links

16	Internet links

1	Graphic





Created d:\biocbld\2.0d\Rpacks\LMGene\chm\LMGene.chm, 31,889 bytes

Compression decreased file by 22,470 bytes.

  adding MD5 sums

* DONE (LMGene)
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: multtest
Loading required package: survival
Loading required package: splines
Warning message:
data set 'sample.eS' not found in: data(sample.eS) 

Error:  chunk 3 
Error in .class1(object) : object "sample.eS" not found
Error in buildVignettes(dir = ".") : Error:  chunk 3 
Error in .class1(object) : object "sample.eS" not found
Execution halted