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Package 98/208OSArchBUILDCHECKBUILD BIN

KEGGSOAP

1.9.2

J. Zhang
Linux (SUSE 9.2) x86_64 OK [ OK ]
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686 OK  OK 
Solaris 2.9 sparc OK  OK 
Windows Server 2003 x86_64 OK  ERROR  ERROR 
Windows Server 2003 NA OK  ERROR  ERROR 
Mac OS X (10.4.6) i686 OK  OK 
Package: KEGGSOAP
Version: 1.9.2
Command: /loc/biocbuild/2.0d/R/bin/R CMD check KEGGSOAP_1.9.2.tar.gz
RetCode: 0
Time: 240.3 seconds
Status: OK
CheckDir: KEGGSOAP.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/loc/biocbuild/2.0d/Rpacks/KEGGSOAP.Rcheck'
* using R version 2.5.0 Under development (unstable) (2006-12-05 r40126)
* checking for file 'KEGGSOAP/DESCRIPTION' ... OK
* this is package 'KEGGSOAP' version '1.9.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'KEGGSOAP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating KEGGSOAP-Ex.R ... OK
* checking examples ... OK
* creating KEGGSOAP-manual.tex ... OK
* checking KEGGSOAP-manual.tex ... OK

KEGGSOAP.Rcheck/00install.out:

* Installing *source* package 'KEGGSOAP' ...
** R
** preparing package for lazy loading
Loading required package: XML
Loading required package: SSOAP
Loading required package: RCurl
** help
 >>> Building/Updating help pages for package 'KEGGSOAP'
     Formats: text html latex example 
  KEGGserver                        text    html    latex
  bget                              text    html    latex   example
  get.genes.by.motifs               text    html    latex   example
  get.genes.by.organism             text    html    latex   example
  get.genes.by.pathway              text    html    latex   example
  get.motifs.by.gene                text    html    latex   example
  get.paralogs.by.gene              text    html    latex   example
  get.pathways.by.genes             text    html    latex   example
  getBestNeighbors                  text    html    latex   example
  list.organisms                    text    html    latex   example
  mark.pathway.by.objects           text    html    latex   example
  search.compounds.by.name          text    html    latex   example
  search.glycans.by.name            text    html    latex   example
** building package indices ...
* DONE (KEGGSOAP)