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Package 33/208OSArchBUILDCHECKBUILD BIN

BioMVCClass

1.3.0

Elizabeth Whalen
Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686 OK  ERROR 
Solaris 2.9 sparc OK [ ERROR ]
Windows Server 2003 x86_64 OK  ERROR  OK 
Windows Server 2003 NA OK  ERROR  OK 
Mac OS X (10.4.6) i686 OK  OK 
Package: BioMVCClass
Version: 1.3.0
Command: /loc/biocbuild/2.0d/R/bin/R CMD check BioMVCClass_1.3.0.tar.gz
RetCode: 1
Time: 32.0 seconds
Status: ERROR
CheckDir: BioMVCClass.Rcheck
Warnings: NA

Command output

* checking for working latex ... OK
* using log directory '/loc/biocbuild/2.0d/Rpacks/BioMVCClass.Rcheck'
* using R version 2.5.0 Under development (unstable) (2006-12-05 r40126)
* checking for file 'BioMVCClass/DESCRIPTION' ... OK
* this is package 'BioMVCClass' version '1.3.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'BioMVCClass' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... ERROR
Loading required package: MVCClass
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: graph
Loading required package: Rgraphviz
Loading required package: geneplotter
Loading required package: annotate
Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so':
  ld.so.1: R: fatal: relocation error: file /loc/biocbuild/2.0d/R/library/Rgraphviz/libs/Rgraphviz.so: symbol gvLayout: referenced symbol not found
Error: .onLoad failed in 'loadNamespace' for 'Rgraphviz'
Error: package 'Rgraphviz' could not be loaded
Execution halted

It looks like this package has a loading problem: see the messages for
details.

BioMVCClass.Rcheck/00install.out:

* Installing *source* package 'BioMVCClass' ...
** R
** inst
** help
 >>> Building/Updating help pages for package 'BioMVCClass'
     Formats: text html latex example 
  GSE-class                         text    html    latex   example
  exprModel-class                   text    html    latex   example
  graphModel-class                  text    html    latex   example
  graphView-class                   text    html    latex   example
  gseModel-class                    text    html    latex   example
  heatmapView-class                 text    html    latex   example
** building package indices ...
* DONE (BioMVCClass)